RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 ADAP2Q9NPF8 381 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 PPIEQ9UNP9 301 aaKnown RBP11.92□□□□□ -0.5
CCDC57-211ENST00000578187 TIMM22Q9Y584 194 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 PCDHGB6Q9Y5F9 930 aa11.92□□□□□ -0.5
CCDC57-211ENST00000578187 NBPF19A0A087WUL8 3843 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 TRGV8A0A0C4DH27 118 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 A0A1W2PR48 441 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 CDK2AP1O14519 115 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 TM9SF1O15321 606 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 HNRNPRO43390 633 aaKnown RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 FGF17O60258 216 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 NPHS1O60500 1241 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 ZG16O60844 167 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 LDB3O75112 727 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 PRKRAO75569 313 aaKnown RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 AIFM1O95831 613 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 GBAP04062 536 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 BPGMP07738 259 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 MYZAPP0CAP1 466 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 NR2F6P10588 404 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 CD46P15529 392 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 CHN1P15882 459 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 TDGF1P3P51864 188 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 KCNK10P57789 538 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 SERTAD2Q14140 314 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 ELAVL1Q15717 326 aaKnown RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 PAGE2Q7Z2X7 111 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 BEST3Q8N1M1 668 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 TMEM178AQ8NBL3 297 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 C7orf57Q8NEG2 295 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 ELP5Q8TE02 316 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 TANKQ92844 425 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 RELTQ969Z4 430 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 ANKRD9Q96BM1 317 aaPredicted RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 CENPHQ9H3R5 247 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 RPF2Q9H7B2 306 aaKnown RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 NMRK1Q9NWW6 199 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 TEX10Q9NXF1 929 aaPredicted RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 VPS29Q9UBQ0 182 aa11.91□□□□□ -0.5
CCDC57-211ENST00000578187 RP1L1Q8IWN7 2480 aaPredicted RBP11.91□□□□□ -0.5
CCDC57-211ENST00000578187 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 PRSS44E7EML9 344 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 MYO1DO94832 1006 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 KLK1P06870 262 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 DHRS4L1P0CG22 281 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 UROSP10746 265 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 TLX1P31314 330 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-211ENST00000578187 SERPINB4P48594 390 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 HMGCS1Q01581 520 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 OC90Q02509 493 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-211ENST00000578187 STX4Q12846 297 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 CASP8Q14790 479 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 CCNYL2Q5T2Q4 361 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 OR52E8Q6IFG1 317 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 RNF165Q6ZSG1 346 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 TRIM46Q7Z4K8 759 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 LGI4Q8N135 537 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 C1orf52Q8N6N3 182 aaKnown RBP11.9□□□□□ -0.5
CCDC57-211ENST00000578187 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 B3GNT7Q8NFL0 401 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 CHTF18Q8WVB6 975 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 C11orf24Q96F05 449 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-211ENST00000578187 MAGED4Q96JG8 741 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 ALOXE3Q9BYJ1 711 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 STMN4Q9H169 189 aaPredicted RBP11.9□□□□□ -0.5
CCDC57-211ENST00000578187 WDR41Q9HAD4 459 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 SIRT5Q9NXA8 310 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 VTI1BQ9UEU0 232 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 ENTPD4Q9Y227 616 aa11.9□□□□□ -0.5
CCDC57-211ENST00000578187 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 A8MUA0 341 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 CCL21O00585 134 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 AZIN1O14977 448 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 CRCPO75575 148 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 ZWINTO95229 277 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 CHRNGP07510 517 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 SERPINB5P36952 375 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 STT3AP46977 705 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 GPR143P51810 404 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 MAPK12P53778 367 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 RAE1P78406 368 aaKnown RBP11.89□□□□□ -0.51
CCDC57-211ENST00000578187 ID2Q02363 134 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 FOLH1Q04609 750 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 TUBA3CQ13748 450 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 OR1C1Q15619 314 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 SPIN4Q56A73 249 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 NDUFAF5Q5TEU4 345 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 KANK2Q63ZY3 851 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 FCRLBQ6BAA4 426 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 GALNT18Q6P9A2 607 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 TUBA3EQ6PEY2 450 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 RPTNQ6XPR3 784 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 ZCCHC23Q6ZST2 131 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 CRLF3Q8IUI8 442 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 TMEM132CQ8N3T6 1108 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
CCDC57-211ENST00000578187 OR14A16Q8NHC5 309 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms