RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RAE1P78406 368 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 ID2Q02363 134 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 KCNAB2Q13303 367 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CUL3Q13618 768 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CYP27C1Q4G0S4 372 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 TMEM35AQ53FP2 167 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 ARL13AQ5H913 290 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 MFSD4BQ5TF39 518 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 TTC19Q6DKK2 380 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 MRM1Q6IN84 353 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 DGAT2L6Q6ZPD8 337 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 MED25Q71SY5 747 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CLNKQ7Z7G1 428 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 RAB43Q86YS6 212 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SCUBE1Q8IWY4 988 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF843Q8N446 348 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 FDCSPQ8NFU4 85 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 METTL6Q8TCB7 284 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 APOBEC4Q8WW27 367 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SELENOMQ8WWX9 145 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CCDC126Q96EE4 140 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 C11orf24Q96F05 449 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 APIPQ96GX9 242 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 FAR2Q96K12 515 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CATSPER2Q96P56 530 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 OR1F2PQ96R84 312 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 TBCDQ9BTW9 1192 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 IQCGQ9H095 443 aaKnown RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 ELOVL6Q9H5J4 265 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 TEX10Q9NXF1 929 aaPredicted RBP8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SENP1Q9P0U3 644 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 FBXW2Q9UKT8 454 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SLC12A4Q9UP95 1085 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 CCL27Q9Y4X3 112 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 ASB4Q9Y574 426 aa8.87□□□□□ -0.99
NPLOC4-219ENST00000576713 SEC16AO15027 2179 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 A0A1W2PR48 441 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 TMEM120BA0PK00 339 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 URADA6NGE7 173 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 SMAD7O15105 426 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 B3GALT2O43825 422 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 LDB3O75112 727 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 CEACAM4O75871 244 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 MLYCDO95822 493 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 JUNP05412 331 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 KLK1P06870 262 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 C8orf89P0DMQ9 161 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 BGNP21810 368 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 SERPINB1P30740 379 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 RAB38P57729 211 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 IFT88Q13099 833 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 SLAMF1Q13291 335 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 AP5B1Q2VPB7 878 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 UGT3A2Q3SY77 523 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 KANK2Q63ZY3 851 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 QSOX2Q6ZRP7 698 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 COMMD6Q7Z4G1 85 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 CUZD1Q86UP6 607 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ZDHHC13Q8IUH4 622 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 OR4N5Q8IXE1 308 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 CNPY4Q8N129 248 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 METTL4Q8N3J2 472 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ZCCHC7Q8N3Z6 543 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 C1orf52Q8N6N3 182 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ANKRD42Q8N9B4 389 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 PLPP5Q8NEB5 264 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 OR2T11Q8NH01 316 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 AGR3Q8TD06 166 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 PSMF1Q92530 271 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 RGMAQ96B86 450 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ANKRD9Q96BM1 317 aaPredicted RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 REPS1Q96D71 796 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 IMMP1LQ96LU5 166 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 SH3GL2Q99962 352 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 NPLQ9BXD5 320 aaPredicted RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 SLC29A3Q9BZD2 475 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF700Q9H0M5 742 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 DDX31Q9H8H2 851 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 KCNK9Q9NPC2 374 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ZNF71Q9NQZ8 489 aaPredicted RBP8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 PSD3Q9NYI0 1048 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 GIMAP2Q9UG22 337 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ADGRE2Q9UHX3 823 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 ZDHHC2Q9UIJ5 367 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 TP53TG5Q9Y2B4 290 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 FIS1Q9Y3D6 152 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 CSAG2Q9Y5P2 127 aa8.86□□□□□ -0.99
NPLOC4-219ENST00000576713 TCRBV16S1A1N1A0A5B0 115 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 GLOD5A6NK44 160 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 EIF4E1BA6NMX2 242 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 A8MUA0 341 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 PROM1O43490 865 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 FGF17O60258 216 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 NPHS1O60500 1241 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 SEMA3DO95025 777 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 AIFM1O95831 613 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 ENO1P06733 434 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 CD63P08962 238 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 FAM58BPP0C7Q3 252 aa8.85□□□□□ -0.99
NPLOC4-219ENST00000576713 ITGAMP11215 1152 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms