RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MFRPQ9BY79 579 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 C1orf21Q9H246 121 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 DDX31Q9H8H2 851 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ANKRA2Q9H9E1 313 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 LIN28AQ9H9Z2 209 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TCF7L2Q9NQB0 619 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 PNO1Q9NRX1 252 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ARMCX1Q9P291 453 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TAGLN3Q9UI15 199 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TRIM33Q9UPN9 1127 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 EXO1Q9UQ84 846 aaKnown RBP7.4□□□□□ -1.22
CCDC40-215ENST00000576033 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF462Q96JM2 2506 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 NSG1A0A0A6YYJ2 146 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ERVH48-1M5A8F1 160 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 PEX12O00623 359 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 LSM1O15116 133 aaKnown RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 PROM1O43490 865 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 MGRN1O60291 552 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 DIAPH2O60879 1101 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ULK1O75385 1050 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 MYO1DO94832 1006 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 SEMA3DO95025 777 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 LRATO95237 230 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 KRT6AP02538 564 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 KRT6BP04259 564 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 KRT16P08779 473 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 CT62P0C5K7 136 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 PRR35P0CG20 571 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 EFNA1P20827 205 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 JAK1P23458 1154 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 TIA1P31483 386 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 SOX18P35713 384 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 CPOXP36551 454 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 KRT6CP48668 564 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ALDH9A1P49189 494 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 MRPL19P49406 292 aaKnown RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 OR4D2P58180 307 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 TAS2R50P59544 299 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ELF3P78545 371 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 RIPK1Q13546 671 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 UBAP2LQ14157 1087 aaKnown RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 NR6A1Q15406 480 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 IMPG1Q17R60 797 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 BTBD16Q32M84 506 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 LSM12Q3MHD2 195 aaKnown RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 RFTN2Q52LD8 501 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 CRTC2Q53ET0 693 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 XKR7Q5GH72 579 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 CCNYL2Q5T2Q4 361 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 NDUFAF5Q5TEU4 345 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 LINC00696Q6ZRV3 163 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 RNF165Q6ZSG1 346 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 CPEB2Q7Z5Q1 589 aaKnown RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 GPR180Q86V85 440 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 CLYBLQ8N0X4 340 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 GALNT16Q8N428 558 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 NFAM1Q8NET5 270 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 C16orf78Q8WTQ4 265 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 THAP4Q8WY91 577 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 PSMF1Q92530 271 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 TM4SF18Q96CE8 201 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 THOC3Q96J01 351 aaKnown RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 EGLN2Q96KS0 407 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 MARK4Q96L34 752 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 IMMP1LQ96LU5 166 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 RILPQ96NA2 401 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 NPLQ9BXD5 320 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 NUF2Q9BZD4 464 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF700Q9H0M5 742 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 MMADHCQ9H3L0 296 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 WDR55Q9H6Y2 383 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF552Q9H707 407 aaPredicted RBP7.39□□□□□ -1.23
CCDC40-215ENST00000576033 BRF2Q9HAW0 419 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 LYRM4Q9HD34 91 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 PRDM9Q9NQV7 894 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ANKRD10Q9NXR5 420 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 PLA2G3Q9NZ20 509 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 VPS29Q9UBQ0 182 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 BAIAP2L1Q9UHR4 511 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 TENM4Q6N022 2769 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 EXPH5Q8NEV8 1989 aa7.39□□□□□ -1.23
CCDC40-215ENST00000576033 GOLGA8QA0A0J9YX86 632 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 TRBV11-1A0A0K0K1C0 115 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 GOLGA8OA6NCC3 632 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 SAGE2PA6NJ88 616 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 C9JVG2 144 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 GOLGA8NF8WBI6 632 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PEX11AO75192 247 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CEACAM4O75871 244 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 HPP00738 406 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CLPSP04118 112 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 ITGB2P05107 769 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 SDC1P18827 310 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 EPHA3P29320 983 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms