RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 EFCAB11Q9BUY7 163 aa16.6■□□□□ 0.25
SCARF1-205ENST00000571272 SCN5AQ14524 2016 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SCO2O43819 266 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 PRKYO43930 277 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 H1F0P07305 194 aaKnown RBP16.59■□□□□ 0.25
SCARF1-205ENST00000571272 CSF3P09919 207 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 UQCRC2P22695 453 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 RPL3P39023 403 aaKnown RBP16.59■□□□□ 0.25
SCARF1-205ENST00000571272 PRLHRP49683 370 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 HOXC5Q00444 222 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 PDZK1Q5T2W1 519 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 PGBD2Q6P3X8 592 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 BRAT1Q6PJG6 821 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 HMGN2P46Q86SG4 172 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 TCEAL8Q8IYN2 117 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 PROKR2Q8NFJ6 384 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 OR8J1Q8NGP2 316 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SLC7A13Q8TCU3 470 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SLC25A46Q96AG3 418 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 TIFAQ96CG3 184 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 PRRG3Q9BZD7 231 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SLC22A4Q9H015 551 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 MVB12BQ9H7P6 319 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SEMA3GQ9NS98 782 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 ITM2BQ9Y287 266 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 MSL3P1P0C860 447 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 TIMP2P16035 220 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 XPAP23025 273 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-205ENST00000571272 CAV3P56539 151 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 HSPB3Q12988 150 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 GLYR1Q49A26 553 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-205ENST00000571272 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 MFSD4BQ5TF39 518 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 ERAP2Q6P179 960 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 OLIG3Q7RTU3 272 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 ZNF366Q8N895 744 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SYT14Q8NB59 555 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SLC7A6Q92536 515 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 AP2M1Q96CW1 435 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 WDFY2Q96P53 400 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 IL17FQ96PD4 163 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 NELL2Q99435 816 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SPG21Q9NZD8 308 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SNX7Q9UNH6 387 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 MGAT4BQ9UQ53 548 aa16.59■□□□□ 0.25
SCARF1-205ENST00000571272 SPIN1Q9Y657 262 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-205ENST00000571272 IQCMA0A1B0GVH7 501 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 TSPAN19P0C672 248 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 ITGB7P26010 798 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 SDC2P34741 201 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 ETV5P41161 510 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 ETV1P50549 477 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 MANFP55145 182 aaKnown RBP16.58■□□□□ 0.25
SCARF1-205ENST00000571272 TAP2Q03519 686 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 MLLT11Q13015 90 aaPredicted RBP16.58■□□□□ 0.25
SCARF1-205ENST00000571272 E2F2Q14209 437 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 PYDC2Q56P42 97 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 Q5BKY6 102 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 C12orf73Q69YU5 71 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 VN1R5Q7Z5H4 357 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 KLHDC8AQ8IYD2 350 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 CREB3L4Q8TEY5 395 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 C17orf50Q8WW18 174 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 SLC5A11Q8WWX8 675 aa16.58■□□□□ 0.25
SCARF1-205ENST00000571272 SLC35F4A4IF30 521 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 FAM214AQ32MH5 1076 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 FLYWCH1Q4VC44 716 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 TMEM201Q5SNT2 666 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 OR2G6Q5TZ20 316 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 SZRD1Q7Z422 152 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 C11orf74Q86VG3 221 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 MEX3DQ86XN8 651 aaKnown RBP16.58■□□□□ 0.24
SCARF1-205ENST00000571272 CTPS2Q9NRF8 586 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 TOR4AQ9NXH8 423 aa16.58■□□□□ 0.24
SCARF1-205ENST00000571272 PLEKHB1Q9UF11 243 aaPredicted RBP16.58■□□□□ 0.24
SCARF1-205ENST00000571272 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
SCARF1-205ENST00000571272 B4DXG7 233 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 QSOX1O00391 747 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 MYL9P24844 172 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 DCDC1P59894 354 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 WDR5P61964 334 aaKnown RBP16.57■□□□□ 0.24
SCARF1-205ENST00000571272 SLC7A9P82251 487 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 GRIN2CQ14957 1233 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 NXPE4Q6UWF7 544 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 TRMT11Q7Z4G4 463 aaKnown RBP16.57■□□□□ 0.24
SCARF1-205ENST00000571272 ZNF438Q7Z4V0 828 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 C1GALT1C1Q96EU7 318 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 NRTNQ99748 197 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 SLC46A2Q9BY10 475 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 HCN2Q9UL51 889 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 PLAGL1Q9UM63 463 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 A0A0B4J293 547 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 CENPBD1B2RD01 187 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 ANHXE9PGG2 379 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 PNLIPRP1P54315 467 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 SPDYE7PQ495Y7 208 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 GPAT3Q53EU6 434 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 CCDC149Q6ZUS6 474 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 NOXA1Q86UR1 476 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 TRAPPC5Q8IUR0 188 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms