RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ARHGAP42A6NI28 874 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 LRRC72A6NJI9 287 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 MEI4A8MW99 385 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 F5H0A9 414 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 EEF2KO00418 725 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 MCF2LO15068 1137 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 SMAD9O15198 467 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 SLC7A4O43246 635 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 KDELR3O43731 214 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 WISP2O76076 250 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 IL1BP01584 269 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 IGLV3-19P01714 112 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 AMBPP02760 352 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 KRT7P08729 469 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 ZNF806P0C7X5 589 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 FAM228BP0C875 321 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 HLA-EP13747 358 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 GOT1P17174 413 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 CYLC1P35663 651 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 NUDT1P36639 197 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 SSR1P43307 286 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 DNA2P51530 1060 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 SGSHP51688 502 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 NDST2P52849 883 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 CTSCP53634 463 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 GALCP54803 685 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 SNRPD1P62314 119 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 GNA12Q03113 381 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 GFPT1Q06210 699 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 RAD51Q06609 339 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 ZNF33AQ06730 810 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 SRSF5Q13243 272 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 DLG2Q15700 870 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 DUOXA1Q1HG43 343 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 KRTAP27-1Q3LI81 207 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 C9orf64Q5T6V5 341 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 TMEM215Q68D42 235 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 EPHX4Q8IUS5 362 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 LRRC49Q8IUZ0 686 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 MMAAQ8IVH4 418 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 ZNF683Q8IZ20 524 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 APCDD1Q8J025 514 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 UMODL1-AS1Q8N2C9 162 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 RASGEF1CQ8N431 466 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 RYBPQ8N488 228 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 CCDC185Q8N715 623 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 RTL3Q8N8U3 475 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 KCTD6Q8NC69 237 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 TEKT4Q8WW24 435 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 RLN3Q8WXF3 142 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 ISG20Q96AZ6 181 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 ZNF501Q96CX3 271 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 PANX2Q96RD6 677 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 NUP85Q9BW27 656 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 GPR174Q9BXC1 333 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 MAK16Q9BXY0 300 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 THAP2Q9H0W7 228 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 ARRDC1-AS1Q9H2J1 176 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 DHX35Q9H5Z1 703 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 NHEJ1Q9H9Q4 299 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 TRMT1Q9NXH9 659 aaKnown RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 FBXL12Q9NXK8 326 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 TAS2R14Q9NYV8 317 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 KLHL9Q9P2J3 617 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 RCOR3Q9P2K3 495 aaPredicted RBP3.72□□□□□ -1.81
NUP88-202ENST00000570937 ZNF69Q9UC07 566 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 PCSK1NQ9UHG2 260 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 ANAPC7Q9UJX3 599 aa3.72□□□□□ -1.81
NUP88-202ENST00000570937 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.72□□□□□ -1.81
NUP88-202ENST00000570937 MUC6Q6W4X9 2439 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 IGHV1OR15-9A0A0B4J2B8 117 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 A0A0D9SEW6 157 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 A0A1W2PPI3 338 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 BCLAF3A2AJT9 711 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 A8MZ25 164 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 KPNA3O00505 521 aaPredicted RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 NTN3O00634 580 aaPredicted RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 BUB1O43683 1085 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 MAGEC1O60732 1142 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 LRCH4O75427 683 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PALMO75781 387 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 RNASEH2AO75792 299 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 PROSCO94903 275 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 KCNK5O95279 499 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 POP4O95707 220 aaKnown RBP3.71□□□□□ -1.82
NUP88-202ENST00000570937 SEMA4FO95754 770 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 HIST1H2ABP04908 130 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 INHBAP08476 426 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 SERPINF2P08697 491 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 HIST1H2ADP20671 130 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 NFKBIAP25963 317 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CD27P26842 260 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 MIPP30301 263 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 CHRNA3P32297 505 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 MAN1A1P33908 653 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 SERPINB6P35237 376 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 SLC1A1P43005 524 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 MAGEA1P43355 309 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 PSMD8P48556 350 aa3.71□□□□□ -1.82
NUP88-202ENST00000570937 SERPINH1P50454 418 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms