RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PPWD1Q96BP3 646 aaKnown RBP12.61□□□□□ -0.39
CNOT1-215ENST00000569020 ATOH8Q96SQ7 321 aa12.61□□□□□ -0.39
CNOT1-215ENST00000569020 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
CNOT1-215ENST00000569020 OR51B5Q9H339 312 aa12.61□□□□□ -0.39
CNOT1-215ENST00000569020 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
CNOT1-215ENST00000569020 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
CNOT1-215ENST00000569020 BOKQ9UMX3 212 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-215ENST00000569020 FAM215AQ9Y5M1 114 aa12.61□□□□□ -0.39
CNOT1-215ENST00000569020 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.61□□□□□ -0.39
CNOT1-215ENST00000569020 DCHS2Q6V1P9 2916 aa12.61□□□□□ -0.39
CNOT1-215ENST00000569020 TEP1Q99973 2627 aaKnown RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 IQANK1A0A1B0GTG1 560 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 SYCE1LA8MT33 242 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 UBXN8O00124 270 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 HCN1O60741 890 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 FAM155BO75949 473 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 C1QAP02745 245 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 CELA3AP09093 270 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 GLI4P10075 376 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 GABRA1P14867 456 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 ALOX15P16050 662 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 STX2P32856 288 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 GMPRP36959 345 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 PIK3CBP42338 1070 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 ARFIP1P53367 373 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 TNFRSF17Q02223 184 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 CAV1Q03135 178 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 DLG1Q12959 904 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 MYBPHQ13203 477 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 ZNF791Q3KP31 576 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 LIPJQ5W064 366 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 SLC29A4Q7RTT9 530 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 ST13P4Q8IZP2 240 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 TEX9Q8N6V9 391 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 HUS1BQ8NHY5 278 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 PAQR8Q8TEZ7 354 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 REPS1Q96D71 796 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 SPACA9Q96E40 222 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 FBXL20Q96IG2 436 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 CNPPD1Q9BV87 410 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 SORBS1Q9BX66 1292 aaKnown RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 SEMA4BQ9NPR2 832 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 ACOT9Q9Y305 439 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 UTP11Q9Y3A2 253 aaKnown RBP12.6□□□□□ -0.39
CNOT1-215ENST00000569020 TSC22D4Q9Y3Q8 395 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 NINQ8N4C6 2090 aa12.6□□□□□ -0.39
CNOT1-215ENST00000569020 FREM3P0C091 2139 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 A0A0G2JNJ9 132 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 PLPP1O14494 284 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 RAD51CO43502 376 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ZWINTO95229 277 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 NADKO95544 446 aaPredicted RBP12.59□□□□□ -0.39
CNOT1-215ENST00000569020 CD1EP15812 388 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 SERPINB3P29508 390 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 HNRNPH2P55795 449 aaKnown RBP12.59□□□□□ -0.39
CNOT1-215ENST00000569020 HERVK_113P63132 956 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ERVK-8P63133 956 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 NAB1Q13506 487 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 SPRED3Q2MJR0 410 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 PRAMEF20Q5VT98 475 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 C18orf63Q68DL7 685 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 RTL6Q6ICC9 239 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 RNF111Q6ZNA4 994 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 DGAT2L6Q6ZPD8 337 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 CCDC91Q7Z6B0 441 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 CCDC25Q86WR0 208 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 FBXW8Q8N3Y1 598 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 RNF175Q8N4F7 328 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 FAM13CQ8NE31 585 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 SPATA4Q8NEY3 305 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 RHEBL1Q8TAI7 183 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 FBF1Q8TES7 1133 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 GAL3ST4Q96RP7 486 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 MTERF1Q99551 399 aaKnown RBP12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ERVK-6Q9BXR3 956 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ZNF703Q9H7S9 590 aaPredicted RBP12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ACTR8Q9H981 624 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 WDR41Q9HAD4 459 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 SH2D2AQ9NP31 389 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ZFP64Q9NPA5 681 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 DMRT3Q9NQL9 472 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 IGSF5Q9NSI5 407 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 LYARQ9NX58 379 aaKnown RBP12.59□□□□□ -0.39
CNOT1-215ENST00000569020 CNIH4Q9P003 139 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 Q9UFV3 132 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ERVK-19Q9WJR5 959 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 F8P00451 2351 aa12.59□□□□□ -0.39
CNOT1-215ENST00000569020 ANKRD17O75179 2603 aaKnown RBP12.58□□□□□ -0.39
CNOT1-215ENST00000569020 A0A087X1B8 175 aa12.58□□□□□ -0.4
CNOT1-215ENST00000569020 CCDC189A1A4V9 331 aa12.58□□□□□ -0.4
CNOT1-215ENST00000569020 HRKO00198 91 aa12.58□□□□□ -0.4
CNOT1-215ENST00000569020 PROM1O43490 865 aa12.58□□□□□ -0.4
CNOT1-215ENST00000569020 OR10H2O60403 315 aa12.58□□□□□ -0.4
CNOT1-215ENST00000569020 PRKRAO75569 313 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms