RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CREG2Q8IUH2 290 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 RELL2Q8NC24 303 aaPredicted RBP14.29□□□□□ -0.12
NME3-211ENST00000568561 BBOF1Q8ND07 529 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 SRFBP1Q8NEF9 429 aaKnown RBP14.29□□□□□ -0.12
NME3-211ENST00000568561 NUBPLQ8TB37 319 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 PAQR8Q8TEZ7 354 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 GPR22Q99680 433 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 RBBP8Q99708 897 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 TMUB1Q9BVT8 246 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 ERVK-6Q9BXR3 956 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 CD244Q9BZW8 370 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 PROK2Q9HC23 129 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 ZFP64Q9NPA5 681 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 SAYSD1Q9NPB0 183 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 TXNDC16Q9P2K2 825 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 ERVK-19Q9WJR5 959 aa14.29□□□□□ -0.12
NME3-211ENST00000568561 SUPT3HB4E1H0 165 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 UBXN8O00124 270 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 HCN1O60741 890 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 SUPT3HO75486 399 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 FAM155BO75949 473 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 RAP1GDS1P52306 607 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 PLIN5Q00G26 463 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 TNFRSF17Q02223 184 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 SLAMF1Q13291 335 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 ZKSCAN8Q15776 578 aaPredicted RBP14.28□□□□□ -0.12
NME3-211ENST00000568561 TMEM35AQ53FP2 167 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 RIPPLY2Q5TAB7 128 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 MED27Q6P2C8 311 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 TMEM64Q6YI46 380 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 LAS2Q8IYD9 372 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 ULK2Q8IYT8 1036 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 FBXW8Q8N3Y1 598 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 NAXEQ8NCW5 288 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 MYRIPQ8NFW9 859 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 OR7G3Q8NG95 312 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 FBXL20Q96IG2 436 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 UBXN10Q96LJ8 280 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 DPH5Q9H2P9 285 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 CLEC4MQ9H2X3 399 aaPredicted RBP14.28□□□□□ -0.12
NME3-211ENST00000568561 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 RPF2Q9H7B2 306 aaKnown RBP14.28□□□□□ -0.12
NME3-211ENST00000568561 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 CRIM1Q9NZV1 1036 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 BOKQ9UMX3 212 aaPredicted RBP14.28□□□□□ -0.12
NME3-211ENST00000568561 PLEKHA6Q9Y2H5 1048 aa14.28□□□□□ -0.12
NME3-211ENST00000568561 CHCHD2Q9Y6H1 151 aaPredicted RBP14.28□□□□□ -0.12
NME3-211ENST00000568561 TCRBV9S1A1TA0A576 114 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 GLOD5A6NK44 160 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 PLPP1O14494 284 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 FBXO45P0C2W1 286 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 ALOX15P16050 662 aaPredicted RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 BMP5P22003 454 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CASP2P42575 452 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 KIR2DL3P43628 341 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 RAB10P61026 200 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 E2F2Q14209 437 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 ZNF267Q14586 743 aaPredicted RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 SLMAPQ14BN4 828 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 BICRALQ6AI39 1079 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 OR4C11Q6IEV9 310 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CHSY3Q70JA7 882 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 MYLK4Q86YV6 388 aaPredicted RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 TGIF2LYQ8IUE0 185 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CTAGE3PQ8IX95 158 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 LRRC25Q8N386 305 aaPredicted RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 LIX1Q8N485 282 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 NEIL3Q8TAT5 605 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CDKL2Q92772 493 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 UBE2E3Q969T4 207 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CMTM7Q96FZ5 175 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 RBM18Q96H35 190 aaKnown RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 MTERF1Q99551 399 aaKnown RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 CPNE1Q99829 537 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 FOXC2Q99958 501 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 WWTR1Q9GZV5 400 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CXXC4Q9H2H0 198 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 GRPEL1Q9HAV7 217 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 NUDT4Q9NZJ9 180 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 OPTCQ9UBM4 332 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 ST6GALNAC2Q9UJ37 374 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 CNOT11Q9UKZ1 510 aaKnown RBP14.27□□□□□ -0.13
NME3-211ENST00000568561 VPS13CQ709C8 3753 aa14.27□□□□□ -0.13
NME3-211ENST00000568561 DOCK7Q96N67 2140 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 C15orf38-AP3S2A0A0A6YYH1 394 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 A0A1W2PS29 197 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 DYRK3O43781 588 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 C1QAP02745 245 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 CLPSP04118 112 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 SLC35E2BP0CK96 405 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 GABRA1P14867 456 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 KLK2P20151 261 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 GDF1P27539 372 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 GP5P40197 560 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 EBPQ15125 230 aaKnown RBP14.26□□□□□ -0.13
NME3-211ENST00000568561 DEPDC1Q5TB30 811 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 GRHL2Q6ISB3 625 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 RNF111Q6ZNA4 994 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 SLC29A4Q7RTT9 530 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms