RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 UBE3DQ7Z6J8 389 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 CDH24Q86UP0 819 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 TAGAPQ8N103 731 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 HUS1BQ8NHY5 278 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 FBF1Q8TES7 1133 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 ZNF721Q8TF20 911 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 ANKRD9Q96BM1 317 aaPredicted RBP17.21■□□□□ 0.35
LINC01238-205ENST00000567549 TSPYL1Q9H0U9 437 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 LIN28AQ9H9Z2 209 aaKnown RBP17.21■□□□□ 0.35
LINC01238-205ENST00000567549 GRHL1Q9NZI5 618 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 KCNN3Q9UGI6 736 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 EDARQ9UNE0 448 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 PCDHGB3Q9Y5G1 929 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 ZNF407Q9C0G0 2248 aa17.21■□□□□ 0.35
LINC01238-205ENST00000567549 FAM90A27PA6NNH2 459 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 H0YIV9 168 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 RTCAO00442 366 aaKnown RBP17.2■□□□□ 0.34
LINC01238-205ENST00000567549 EPORP19235 508 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ARL1P40616 181 aaPredicted RBP17.2■□□□□ 0.34
LINC01238-205ENST00000567549 GPX6P59796 221 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ASPHQ12797 758 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 CUL3Q13618 768 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 CDSNQ15517 529 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 SPRED3Q2MJR0 410 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF750Q32MQ0 723 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF585AQ6P3V2 769 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 RNF111Q6ZNA4 994 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 NCCRP1Q6ZVX7 275 aaPredicted RBP17.2■□□□□ 0.34
LINC01238-205ENST00000567549 TRILQ7L0X0 811 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 TAOK1Q7L7X3 1001 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 CMC1Q7Z7K0 106 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 NUDT13Q86X67 352 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 LIX1Q8N485 282 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 TMEM251Q8N6I4 163 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 SPACA9Q96E40 222 aaPredicted RBP17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ZNF559Q9BR84 538 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 DMRT3Q9NQL9 472 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 AHSPQ9NZD4 102 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ITGB1BP2Q9UKP3 347 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 ATG4BQ9Y4P1 393 aa17.2■□□□□ 0.34
LINC01238-205ENST00000567549 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.2■□□□□ 0.34
LINC01238-205ENST00000567549 TRGV5A0A0B4J1U4 118 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 TP53I11O14683 189 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 FGF17O60258 216 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 ETHE1O95571 254 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 NR2F6P10588 404 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 MSX1P28360 303 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 MAGEA5P43359 124 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 ZFP36L2P47974 494 aaKnown RBP17.19■□□□□ 0.34
LINC01238-205ENST00000567549 SERPINB8P50452 374 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 FOLH1Q04609 750 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 C2orf54Q08AI8 447 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 SLC25A35Q3KQZ1 300 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 HLA-DQA1Q5Y7H0 255 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 C16orf47Q6ZP98 133 aaPredicted RBP17.19■□□□□ 0.34
LINC01238-205ENST00000567549 FBXW8Q8N3Y1 598 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 FAM13CQ8NE31 585 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 FBXO25Q8TCJ0 367 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 PAQR8Q8TEZ7 354 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 RIT1Q92963 219 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 ATP6V1E2Q96A05 226 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 MTERF1Q99551 399 aaKnown RBP17.19■□□□□ 0.34
LINC01238-205ENST00000567549 CNPPD1Q9BV87 410 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 IGSF5Q9NSI5 407 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 IKBKGQ9Y6K9 419 aa17.19■□□□□ 0.34
LINC01238-205ENST00000567549 INTS1Q8N201 2190 aaKnown RBP17.18■□□□□ 0.34
LINC01238-205ENST00000567549 ATP6AP2A0A1C7CYW4 349 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 FOXE1O00358 373 aaPredicted RBP17.18■□□□□ 0.34
LINC01238-205ENST00000567549 SAP18O00422 153 aaKnown RBP17.18■□□□□ 0.34
LINC01238-205ENST00000567549 PLPP1O14494 284 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 ZNHIT1O43257 154 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 CDH16O75309 829 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 GUCY1B2O75343 617 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 SH3BGRLO75368 114 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 ATP6AP2O75787 350 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 GPR75O95800 540 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 IGKV3-11P04433 115 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 TYK2P29597 1187 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 NRG3P56975 720 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 NUP107P57740 925 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 ID2Q02363 134 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 PCBP2Q15366 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC01238-205ENST00000567549 PFKFB4Q16877 469 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 PAGE2Q7Z2X7 111 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 MARVELD2Q8N4S9 558 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 NXNL1Q96CM4 212 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 GAL3ST4Q96RP7 486 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 SERPINI1Q99574 410 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 TTYH2Q9BSA4 534 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 DDX31Q9H8H2 851 aaKnown RBP17.18■□□□□ 0.34
LINC01238-205ENST00000567549 ZFP64Q9NPA5 681 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 SNX15Q9NRS6 342 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 PNPLA3Q9NST1 481 aa17.18■□□□□ 0.34
LINC01238-205ENST00000567549 MTRF1LQ9UGC7 380 aaKnown RBP17.18■□□□□ 0.34
LINC01238-205ENST00000567549 MYOCOSA0A1B0GUC4 107 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 G3V3Y1 287 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 PROM1O43490 865 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 SEMA3DO95025 777 aa17.17■□□□□ 0.34
LINC01238-205ENST00000567549 KLHL2O95198 593 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms