RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 KCNAB2Q13303 367 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 MYBPC3Q14896 1274 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 RFTN2Q52LD8 501 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-208ENST00000567250 C6orf136Q5SQH8 315 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 HPS6Q86YV9 775 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 B3GNT7Q8NFL0 401 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 M1APQ8TC57 530 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 ANKRD9Q96BM1 317 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-208ENST00000567250 IMMP1LQ96LU5 166 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 WDR77Q9BQA1 342 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-208ENST00000567250 SLC25A23Q9BV35 468 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 PNPOQ9NVS9 261 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.39□□□□□ -0.59
SF3B3-208ENST00000567250 TEKT2Q9UIF3 430 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 UTS2RQ9UKP6 389 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 MAPRE3Q9UPY8 281 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 CLDN16Q9Y5I7 305 aa11.39□□□□□ -0.59
SF3B3-208ENST00000567250 CROCCQ5TZA2 2017 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 IGHV3-20A0A0C4DH32 117 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 C17orf105B2RV13 164 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 TGFBR3LH3BV60 316 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 ERAL1O75616 437 aaKnown RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 CEACAM4O75871 244 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 DNAJB5O75953 348 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 JUNP05412 331 aaKnown RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 PRR35P0CG20 571 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 SLC35E2P0CK97 266 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 SDC1P18827 310 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 GALNSP34059 522 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 CLCN2P51788 898 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 ID2Q02363 134 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 C2orf80Q0P641 193 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 SPRED3Q2MJR0 410 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 VWA5B1Q5TIE3 1220 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 AGAP7PQ5VUJ5 663 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 R3HCC1LQ7Z5L2 792 aaKnown RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 GALNT12Q8IXK2 581 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 LRRC25Q8N386 305 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 LSM14AQ8ND56 463 aaKnown RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 MORN4Q8NDC4 146 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 C9orf43Q8TAL5 461 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 TM9SF4Q92544 642 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 VMP1Q96GC9 406 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 ZNF764Q96H86 408 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 THOC3Q96J01 351 aaKnown RBP11.38□□□□□ -0.59
SF3B3-208ENST00000567250 PPP1R36Q96LQ0 422 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 C3orf30Q96M34 536 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 AGAP4Q96P64 663 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 SIKE1Q9BRV8 207 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 MMP25Q9NPA2 562 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 CACNA1BQ00975 2339 aa11.38□□□□□ -0.59
SF3B3-208ENST00000567250 DOCK10Q96BY6 2186 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 MED13Q9UHV7 2174 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 A8MUA0 341 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 ATP1B1P05026 303 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 FAM87AP0C7U9 286 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 BCKDHAP12694 445 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 CPMP14384 443 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 PORP16435 677 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-208ENST00000567250 LBPP18428 481 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 CSNK2A2P19784 350 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-208ENST00000567250 NTSP30990 170 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 XKP51811 444 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 PGDP52209 483 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 FOXK1P85037 733 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 EMX2Q04743 252 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 LINC00303Q3SY05 128 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 CRB2Q5IJ48 1285 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 FAM71E1Q6IPT2 247 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 OGFOD2Q6N063 350 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 TCTN3Q6NUS6 607 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 FAM47EQ6ZV65 393 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 ACAD11Q709F0 780 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 OR4N5Q8IXE1 308 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 LIX1Q8N485 282 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 SLC5A8Q8N695 610 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 FDCSPQ8NFU4 85 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.37□□□□□ -0.59
SF3B3-208ENST00000567250 RIT1Q92963 219 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 MTERF3Q96E29 417 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 TSSK3Q96PN8 268 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 MESP1Q9BRJ9 268 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 EPS8L2Q9H6S3 715 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 KCNK13Q9HB14 408 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 C5AR2Q9P296 337 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 ABI3Q9P2A4 366 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 HEY2Q9UBP5 337 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 PPIEQ9UNP9 301 aaKnown RBP11.37□□□□□ -0.59
SF3B3-208ENST00000567250 ZNF451Q9Y4E5 1061 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 USH1CQ9Y6N9 552 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 IGSF10Q6WRI0 2623 aa11.37□□□□□ -0.59
SF3B3-208ENST00000567250 A6NL46 340 aa11.36□□□□□ -0.59
SF3B3-208ENST00000567250 SDHDO14521 159 aa11.36□□□□□ -0.59
SF3B3-208ENST00000567250 PGRMC2O15173 223 aa11.36□□□□□ -0.59
SF3B3-208ENST00000567250 ATXN7O15265 892 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-208ENST00000567250 POLR3GO15318 223 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms