RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 NXPE2Q96DL1 559 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 CDCA3Q99618 268 aaPredicted RBP5.25□□□□□ -1.57
KARS-208ENST00000566772 HPS4Q9NQG7 708 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 CTNNA3Q9UI47 895 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 MYO6Q9UM54 1294 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 CHMP2BQ9UQN3 213 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 ETV7Q9Y603 341 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 COLEC10Q9Y6Z7 277 aa5.25□□□□□ -1.57
KARS-208ENST00000566772 ATP6AP2A0A1C7CYW4 349 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 A0A1W2PN81 502 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 A0A1W2PPI3 338 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 ANKRD30BLA7E2S9 258 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 HNRNPCL2B2RXH8 293 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 OVOL3O00110 214 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 FPGTO14772 594 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 XPO1O14980 1071 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 XPNPEP2O43895 674 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 CTSVO60911 334 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 CSDE1O75534 798 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 MT-ND2P03891 347 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 IGHV4-31P0DP07 118 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 ANPEPP15144 967 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 MSH3P20585 1137 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 FCARP24071 287 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 IL4RP24394 825 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 RBMS1P29558 406 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 FCGR2BP31994 310 aaPredicted RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 EPHX2P34913 555 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 CHRNA7P36544 502 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 TAGLN2P37802 199 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 PTGER3P43115 390 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 NUMBP49757 651 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 GAS1P54826 345 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 GEMP55040 296 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 GABPAQ06546 454 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 CEACAM7Q14002 265 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 BTG3Q14201 252 aaPredicted RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 KIR2DS3Q14952 304 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 SRSF7Q16629 238 aaKnown RBP eCLIP5.24□□□□□ -1.57
KARS-208ENST00000566772 SHROOM1Q2M3G4 852 aaPredicted RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 SLC36A3Q495N2 470 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 CCDC152Q4G0S7 254 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 LRRC23Q53EV4 343 aaPredicted RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 SPATA46Q5T0L3 261 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 PXDC1Q5TGL8 231 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 IRAK1BP1Q5VVH5 260 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 LIPKQ5VXJ0 399 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 MORN5Q5VZ52 161 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 SNRNP48Q6IEG0 339 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 C15orf52Q6ZUT6 534 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 MRPL10Q7Z7H8 261 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 YRDCQ86U90 279 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 NRACQ8N912 160 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 STKLD1Q8NE28 680 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 ZNF473Q8WTR7 871 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 TUBGCP3Q96CW5 907 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 BPIFA2Q96DR5 249 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 GPA33Q99795 319 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 FUNDC2Q9BWH2 189 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 SF3B5Q9BWJ5 86 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 NUSAP1Q9BXS6 441 aaKnown RBP5.24□□□□□ -1.57
KARS-208ENST00000566772 NACA2Q9H009 215 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 IL25Q9H293 177 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 TEKT2Q9UIF3 430 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 COX11Q9Y6N1 276 aa5.24□□□□□ -1.57
KARS-208ENST00000566772 ZMYM6O95789 1325 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 MTMR11A4FU01 709 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 EME2A4GXA9 379 aaPredicted RBP5.23□□□□□ -1.57
KARS-208ENST00000566772 ASPDHA6ND91 283 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 CXCL11O14625 94 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 CHEK1O14757 476 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 MAGEB3O15480 346 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 SYNGR3O43761 229 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 GPRIN2O60269 458 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 TXNDC12O95881 172 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 CA3P07451 260 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ASNSP08243 561 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 HMBSP08397 361 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 GSTA2P09210 222 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 TNNI3P19429 210 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ATP6V1C1P21283 382 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ITGA3P26006 1051 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 PTPN4P29074 926 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 NR2C2P49116 596 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 TRAF2Q12933 501 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ZBTB17Q13105 803 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 KEAP1Q14145 624 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 HEPACAMQ14CZ8 416 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 HLFQ16534 295 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 DEFB115Q30KQ5 88 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 SLC25A53Q5H9E4 307 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ZNF776Q68DI1 518 aaPredicted RBP5.23□□□□□ -1.57
KARS-208ENST00000566772 SLC27A4Q6P1M0 643 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ARHGAP11AQ6P4F7 1023 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 TRIM65Q6PJ69 517 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 CEACAM20Q6UY09 585 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 SFR1Q86XK3 245 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 ZNF679Q8IYX0 411 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 TRIM58Q8NG06 486 aa5.23□□□□□ -1.57
KARS-208ENST00000566772 OR7A2PQ8NGA2 310 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms