RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LATS2Q9NRM7 1088 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 SLCO1C1Q9NYB5 712 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 C2orf81A6NN90 581 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 LGALS8O00214 317 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 DVL2O14641 736 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 LZTS3O60299 673 aaPredicted RBP15.5■□□□□ 0.07
LINC00554-201ENST00000564841 CD79BP40259 229 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 CRATP43155 626 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 GPR139Q6DWJ6 353 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 PTRHD1Q6GMV3 140 aaKnown RBP15.5■□□□□ 0.07
LINC00554-201ENST00000564841 SHFQ7M4L6 423 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 ARL14EPQ8N8R7 260 aaPredicted RBP15.5■□□□□ 0.07
LINC00554-201ENST00000564841 SKA2Q8WVK7 121 aaPredicted RBP15.5■□□□□ 0.07
LINC00554-201ENST00000564841 ASIC4Q96FT7 647 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 DHRS7Q9Y394 339 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 ANKRD36A6QL64 1941 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 GREB1Q4ZG55 1949 aa15.5■□□□□ 0.07
LINC00554-201ENST00000564841 SHISA3A0PJX4 238 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ACSL4O60488 711 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ATG13O75143 517 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 HTR7P34969 479 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ETV5P41161 510 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 TTPAP49638 278 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ETV1P50549 477 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 PTPN5P54829 565 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 VSX2P58304 361 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 RNASE12Q5GAN4 147 aaKnown RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SYT12Q8IV01 421 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 CRIPAKQ8N1N5 446 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 CARNMT1Q8N4J0 409 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 TCEANCQ8N8B7 351 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 OR52H1Q8NGJ2 320 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF461Q8TAF7 563 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 GATAD2BQ8WXI9 593 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SLC9A6Q92581 669 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 EID2BQ96D98 161 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 TMEM43Q9BTV4 400 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 HDHD2Q9H0R4 259 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ACER3Q9NUN7 267 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SH3BP4Q9P0V3 963 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 NCKAP1Q9Y2A7 1128 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 YIPF1Q9Y548 306 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 GBF1Q92538 1859 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 GABRR3A8MPY1 467 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SLC43A1O75387 559 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 KELP23276 732 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SLC11A2P49281 568 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 CRISP1P54107 249 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SELENOWP63302 87 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 RIN1Q13671 783 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 TEAD4Q15561 434 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 RNF219Q5W0B1 726 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 UNC5DQ6UXZ4 953 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 KANSL1Q7Z3B3 1105 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF558Q96NG5 402 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SMG9Q9H0W8 520 aaKnown RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 FTSJ1Q9UET6 329 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ING4Q9UNL4 249 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 PADI2Q9Y2J8 665 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 WASH4PA8MWX3 477 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 PROM1O43490 865 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SLC25A14O95258 325 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 TPOP07202 933 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 PXNP49023 591 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SRP9P49458 86 aaKnown RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SMAD3P84022 425 aaKnown RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF91Q05481 1191 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 NOXRED1Q6NXP6 359 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ERICH5Q6P6B1 374 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF782Q6ZMW2 699 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 DNAJB7Q7Z6W7 309 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 GPAT4Q86UL3 456 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 NANOGP1Q8N7R0 232 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 RBPMSQ93062 196 aaKnown RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 SORCS2Q96PQ0 1159 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 PKP4Q99569 1192 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 RBCK1Q9BYM8 510 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 NMNAT1Q9HAN9 279 aaPredicted RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 CNOT2Q9NZN8 540 aaKnown RBP15.49■□□□□ 0.07
LINC00554-201ENST00000564841 ACSL6Q9UKU0 697 aa15.49■□□□□ 0.07
LINC00554-201ENST00000564841 GOLGA4Q13439 2230 aaKnown RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 LINC01387J3KSC0 135 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 TLR4O00206 839 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 PRAMEF4O60810 478 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 CLDN9O95484 217 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 URODP06132 367 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 TFPIP10646 304 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 LPOP22079 712 aaPredicted RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 GPR176Q14439 515 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 PRAMEF9Q5VWM5 478 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 ADNP2Q6IQ32 1131 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 SLC8B1Q6J4K2 584 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 ZNF730Q6ZMV8 503 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 LILRB1Q8NHL6 650 aaPredicted RBP15.48■□□□□ 0.07
LINC00554-201ENST00000564841 KLHL6Q8WZ60 621 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 TSSK6Q9BXA6 273 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 SLC25A19Q9HC21 320 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 STOML2Q9UJZ1 356 aa15.48■□□□□ 0.07
LINC00554-201ENST00000564841 PPIEQ9UNP9 301 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms