RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 SLC12A2P55011 1212 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TSPY1Q01534 308 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 POU5F1BQ06416 359 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZNF33BQ06732 778 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 MGAT3Q09327 533 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ABRQ12979 859 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 MRPL28Q13084 256 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SPP2Q13103 211 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 MAD2L1BPQ15013 274 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RPS6KA2Q15349 733 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 UGT3A2Q3SY77 523 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RUNDC3AQ59EK9 446 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PCID2Q5JVF3 399 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 OTUD3Q5T2D3 398 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HACD4Q5VWC8 232 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RNLSQ5VYX0 342 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 FCRL6Q6DN72 434 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 KIAA0930Q6ICG6 404 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TYW3Q6IPR3 259 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RGS7BPQ6MZT1 257 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TMEM65Q6PI78 240 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 BRAT1Q6PJG6 821 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 Q6ZWC4 215 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 LRRC8DQ7L1W4 858 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 NRARPQ7Z6K4 114 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GALNT10Q86SR1 603 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RBM23Q86U06 439 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PIGZQ86VD9 579 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 AMIGO1Q86WK6 493 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZFAND4Q86XD8 727 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SNX29P2Q8IUI4 249 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CHPFQ8IZ52 775 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PCSK9Q8NBP7 692 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RHEBL1Q8TAI7 183 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 AGR3Q8TD06 166 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SLC47A1Q96FL8 570 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SERPINB11Q96P15 392 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 FCRL4Q96PJ5 515 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CSPG4P5Q96PW8 444 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TRNT1Q96Q11 434 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SDHCQ99643 169 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 APOL2Q9BQE5 337 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TTYH2Q9BSA4 534 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GABARAPL3Q9BY60 117 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 UCK2Q9BZX2 261 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SRRQ9GZT4 340 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 COA1Q9GZY4 146 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PIGUQ9H490 435 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CXorf36Q9H7Y0 433 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 FOLH1BQ9HBA9 442 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 WASH6PQ9NQA3 447 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CHST12Q9NRB3 414 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TRMT13Q9NUP7 481 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 LYARQ9NX58 379 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 EMC3Q9P0I2 261 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 COL20A1Q9P218 1284 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ENOPH1Q9UHY7 261 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 FEM1BQ9UK73 627 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ING4Q9UNL4 249 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 DIMT1Q9UNQ2 313 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PCDHA10Q9Y5I2 948 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ZNF541Q9H0D2 1346 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 OR6C70A6NIJ9 312 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 B4DXG7 233 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GNGT2O14610 69 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 AZIN1O14977 448 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ANKRD28O15084 1053 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 OGTO15294 1046 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ORC5O43913 435 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 SLC22A3O75751 556 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 STBD1O95210 358 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CELF2O95319 508 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 WISP3O95389 354 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PGK1P00558 417 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CDK1P06493 297 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ATXN1LP0C7T5 689 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ADORA3P0DMS8 318 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RRASP10301 218 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 DBTP11182 482 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ODC1P11926 461 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HLA-EP13747 358 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TNNI3P19429 210 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CYP2B6P20813 491 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 IGFBP5P24593 272 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 PSMB4P28070 264 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 GTF2E2P29084 291 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 UQCRC1P31930 480 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CA5AP35218 305 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 KRT20P35900 424 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RPL34P49207 117 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CLCN3P51790 818 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 HERVK_113P63132 956 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 ERVK-8P63133 956 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 CCNA1P78396 465 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 TFAMQ00059 246 aaKnown RBP3.35□□□□□ -1.87
LINC01416-201ENST00000563553 RHAGQ02094 409 aa3.35□□□□□ -1.87
LINC01416-201ENST00000563553 IRF3Q14653 427 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms