RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SENP5Q96HI0 755 aaPredicted RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 ALPK1Q96QP1 1244 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 RHOXF2Q9BQY4 288 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 GPATCH1Q9BRR8 931 aaKnown RBP10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 MS4A8Q9BY19 250 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 ZFP64Q9NPA5 681 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 CRIM1Q9NZV1 1036 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 CNIH4Q9P003 139 aa10.9□□□□□ -0.66
CARMIL3-204ENST00000561354 ABCA4P78363 2273 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 A6NNC1 897 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 AHRRA9YTQ3 701 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 DVL2O14641 736 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 DYRK3O43781 588 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 RFPL3SP0C7P2 107 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 EPORP19235 508 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 CPN2P22792 545 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 UQCRC1P31930 480 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 HSPA7P48741 367 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 SLC12A2P55011 1212 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ATP6V0D1P61421 351 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 KCNJ2P63252 427 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 POU4F1Q01851 419 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ID2Q02363 134 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 IRF8Q02556 426 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 FOXD4Q12950 439 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 CBLBQ13191 982 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 CHIT1Q13231 466 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 DAZAP2Q15038 168 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 AP5B1Q2VPB7 878 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 FLYWCH1Q4VC44 716 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 CHSY3Q70JA7 882 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 HDXQ7Z353 690 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 CAMKMTQ7Z624 323 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 CDC20BQ86Y33 519 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 C9orf40Q8IXQ3 194 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 LAS2Q8IYD9 372 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ULK2Q8IYT8 1036 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 SNX31Q8N9S9 440 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 RELL2Q8NC24 303 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 PDPRQ8NCN5 879 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 BBOF1Q8ND07 529 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 GOT1L1Q8NHS2 421 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 NEIL3Q8TAT5 605 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 RNASE6Q93091 150 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 UBE2E3Q969T4 207 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ESAMQ96AP7 390 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 MBD6Q96DN6 1003 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 LRRC46Q96FV0 321 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 RBM18Q96H35 190 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 FBXL20Q96IG2 436 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ART5Q96L15 291 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 RUNDC3BQ96NL0 473 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 DGAT2Q96PD7 388 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 SH3GL2Q99962 352 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 PROK2Q9HC23 129 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 DLL4Q9NR61 685 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ZNF446Q9NWS9 450 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 MS4A12Q9NXJ0 267 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 FAM53CQ9NYF3 392 aa10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 PTBP2Q9UKA9 531 aaKnown RBP10.89□□□□□ -0.67
CARMIL3-204ENST00000561354 ARHGAP21Q5T5U3 1957 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 LRRC3CA6NJW4 275 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 E7ESA3 106 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 RTCAO00442 366 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 FGF17O60258 216 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 EPPINO95925 133 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 C1QAP02745 245 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 CD1DP15813 335 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 SERPINB3P29508 390 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 SERPINB1P30740 379 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 CEACAM8P31997 349 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 TIMP3P35625 211 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 MSH2P43246 934 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 ASCL1P50553 236 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 VSNL1P62760 191 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 PCDH1Q08174 1060 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 AKAP6Q13023 2319 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 PDIA2Q13087 525 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 SNTB1Q13884 538 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 FBXO48Q5FWF7 155 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 TBCELQ5QJ74 424 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 OR4N5Q8IXE1 308 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 IFT20Q8IY31 132 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 SPATA6LQ8N4H0 392 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 FBXO36Q8NEA4 188 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 TANKQ92844 425 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 TSPAN17Q96FV3 270 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 KRT12Q99456 494 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 PHACTR1Q9C0D0 580 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 SLC6A15Q9H2J7 730 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 RPF2Q9H7B2 306 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 VIPAS39Q9H9C1 493 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 ZNF629Q9UEG4 869 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 PLEKHA6Q9Y2H5 1048 aa10.88□□□□□ -0.67
CARMIL3-204ENST00000561354 RPH3AQ9Y2J0 694 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms