RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 GIMAP2Q9UG22 337 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 APOC1P02654 83 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 MT-ND5P03915 603 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 CDKN2DP55273 166 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 HNRNPA1L2Q32P51 320 aaKnown RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 ZFAND4Q86XD8 727 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF283Q8N7M2 679 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 BBS10Q8TAM1 723 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 ACOT12Q8WYK0 555 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 DUSP23Q9BVJ7 150 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 C12orf4Q9NQ89 552 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 ACOX3O15254 700 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 C8BP07358 591 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 RPA4Q13156 261 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 KIAA0895LQ68EN5 471 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 KCTD18Q6PI47 426 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 INO80EQ8NBZ0 244 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 ACVR1CQ8NER5 493 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 OR14I1A6ND48 311 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 A8MVJ9 347 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 GJA8P48165 433 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 CLDN10P78369 228 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 PRAMEF17Q5VTA0 474 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 KIAA1614Q5VZ46 1190 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 TOE1Q96GM8 510 aaKnown RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 TMEM41AQ96HV5 264 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 ERMAPQ96PL5 475 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 HPF1Q9NWY4 346 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 TRIOBPQ9H2D6 2365 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 A0A096LPI6 279 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 PGCP20142 388 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 CARD17Q5XLA6 110 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 TSPEARQ8WU66 669 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 BCKDHAP12694 445 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 F8A1P23610 371 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 SHC2P98077 582 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 RHDQ02161 417 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 FIGNL1Q6PIW4 674 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 CRB3Q9BUF7 120 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 NANSQ9NR45 359 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 DNAJC27Q9NZQ0 273 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 PFDN2Q9UHV9 154 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 CD72P21854 359 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
TRAF3-208ENST00000560371 CARTPTQ16568 116 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 C1orf220Q5T0J3 134 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 RPL13AP3Q6NVV1 102 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 OR2T33Q8NG76 320 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 OR51A7Q8NH64 312 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 NINJ1Q92982 152 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 SP140LQ9H930 580 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 SLC7A11Q9UPY5 501 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 ARSDP51689 593 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 RNF220Q5VTB9 566 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF778Q96MU6 729 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 APOOQ9BUR5 198 aa12.88□□□□□ -0.35
TRAF3-208ENST00000560371 SLC22A1O15245 554 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 PACRGLQ8N7B6 248 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 OR5T2Q8NGG2 359 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 CASD1Q96PB1 797 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 MROQ9BYG7 248 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 C1orf21Q9H246 121 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 H3BUI4 141 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 RTCAO00442 366 aaKnown RBP12.87□□□□□ -0.35
TRAF3-208ENST00000560371 RFPL1O75677 317 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 IFNA21P01568 189 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 ALDOAP04075 364 aaKnown RBP12.87□□□□□ -0.35
TRAF3-208ENST00000560371 CLDN2P57739 230 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 TAS2R43P59537 309 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 DSG2Q14126 1118 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 LRRC69Q6ZNQ3 347 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 GID4Q8IVV7 300 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 DENND6BQ8NEG7 585 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 CER1O95813 267 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 SLC16A8O95907 504 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 EN2P19622 333 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-208ENST00000560371 SRYQ05066 204 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 SERTAD2Q14140 314 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 ABRAXAS2Q15018 415 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 BTBD16Q32M84 506 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 SLC27A4Q6P1M0 643 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 GALNT10Q86SR1 603 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 OR4N5Q8IXE1 308 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 OR51I1Q9H343 314 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 GJE1A6NN92 205 aa12.87□□□□□ -0.35
TRAF3-208ENST00000560371 H2BFMP0C1H6 154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms