RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 FUCA1P04066 466 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 PIPP12273 146 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TNFRSF1BP20333 461 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 PSMB9P28065 219 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 UGT2B10P36537 528 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TGFBR2P37173 567 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 BCL6P41182 706 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MAP2K4P45985 399 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 OR1E2P47887 323 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 BMXP51813 675 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MAPK10P53779 464 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 CRISP1P54107 249 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ADPRHP54922 357 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 STXBP1P61764 594 aaKnown RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TUBA1BP68363 451 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 HSPB3Q12988 150 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 IRF3Q14653 427 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 SLC9A5Q14940 896 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MAPK11Q15759 364 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 RAB30Q15771 203 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 RPE65Q16518 533 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 SMN1Q16637 294 aaKnown RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM201Q5SNT2 666 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 NDUFAF5Q5TEU4 345 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF770Q6IQ21 691 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF425Q6IV72 752 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TNFAIP8L2Q6P589 184 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ABHD17CQ6PCB6 329 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 CD300LDQ6UXZ3 194 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 CCDC81Q6ZN84 652 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 AHSA2Q719I0 299 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TUBA1AQ71U36 451 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ADCK2Q7Z695 626 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 SLC44A2Q8IWA5 706 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MFSD9Q8NBP5 474 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 OR2L3Q8NG85 312 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 GPR32P1Q8NGA4 272 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 DYNC2LI1Q8TCX1 351 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 GANCQ8TET4 914 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 EXOSC8Q96B26 276 aaKnown RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MS4A6EQ96DS6 147 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MRPL38Q96DV4 380 aaKnown RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 PLEKHA8Q96JA3 519 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 GUCD1Q96NT3 240 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 AMDHD1Q96NU7 426 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 DACH2Q96NX9 599 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 COL21A1Q96P44 957 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ALPK1Q96QP1 1244 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 BBS4Q96RK4 519 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 MYOCQ99972 504 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 NIPSNAP1Q9BPW8 284 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 FUZQ9BT04 418 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 UCK2Q9BZX2 261 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ROGDIQ9GZN7 287 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 AICDAQ9GZX7 198 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 RACGAP1Q9H0H5 632 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 GLIPR2Q9H4G4 154 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 NMNAT1Q9HAN9 279 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 FBXO8Q9NRD0 319 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 RASSF1Q9NS23 344 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 GIMAP4Q9NUV9 329 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 IMP3Q9NV31 184 aaKnown RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 FAIMQ9NVQ4 179 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 TEX10Q9NXF1 929 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-212ENST00000559937 CALML5Q9NZT1 146 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ANKMY1Q9P2S6 941 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 DUSP12Q9UNI6 340 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 KCNK6Q9Y257 313 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 NCKAP1Q9Y2A7 1128 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 SH3GLB1Q9Y371 365 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 ASB4Q9Y574 426 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 A3GALT2U3KPV4 340 aa7.66□□□□□ -1.18
SMAD3-212ENST00000559937 A0A0G2JPF8 293 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PRSS38A1L453 326 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ANTXRLA6NF34 631 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PDZK1P1A8MUH7 402 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HNRNPCL2B2RXH8 293 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HNRNPCL3B7ZW38 293 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CLDN25C9JDP6 229 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ANHXE9PGG2 379 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 J3KTA2 159 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 SYT5O00445 386 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TOR1BO14657 336 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TNFRSF10CO14798 259 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 PCDH17O14917 1159 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HAT1O14929 419 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 TRANK1O15050 2925 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CASC3O15234 703 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ASNA1O43681 348 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 B4GALT2O60909 372 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CBFA2T3O75081 653 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 VIPP01282 170 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 H1F0P07305 194 aaKnown RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 FHP07954 510 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HNRNPCL4P0DMR1 293 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 OSMP13725 252 aa7.65□□□□□ -1.18
SMAD3-212ENST00000559937 CSNK2A2P19784 350 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 HIST1H1TP22492 207 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-212ENST00000559937 ATP5A1P25705 553 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms