RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 B3GALT1Q9Y5Z6 326 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 SPTBP11277 2137 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 SYNDIG1LA6NDD5 238 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 WASHC1A8K0Z3 465 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 FXYD1O00168 92 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 FGF17O60258 216 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 LDB3O75112 727 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 CDC123O75794 336 aaPredicted RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 BMP10O95393 424 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 C8orf89P0DMQ9 161 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 CPMP14384 443 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 PORP16435 677 aaPredicted RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 ZNF28P17035 718 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 PPIBP23284 216 aaKnown RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 CDKN2CP42773 168 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 HBA1P69905 142 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 STX4Q12846 297 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 HSPB3Q12988 150 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 SERTAD2Q14140 314 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 CAPRIN1Q14444 709 aaKnown RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 MFSD4BQ5TF39 518 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 FAM180BQ6P0A1 224 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 C8orf82Q6P1X6 216 aaPredicted RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 QSOX2Q6ZRP7 698 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 COX15Q7KZN9 410 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 ZC3H7AQ8IWR0 971 aaKnown RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 OR8J3Q8NGG0 315 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 ANKRD9Q96BM1 317 aaPredicted RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 GPATCH1Q9BRR8 931 aaKnown RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 PELOQ9BRX2 385 aaKnown RBP15.85■□□□□ 0.13
SNX1-203ENST00000558040 B3GNT4Q9C0J1 378 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 TGIF2Q9GZN2 237 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 SEMA3GQ9NS98 782 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 SLAMF8Q9P0V8 285 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 AP3M1Q9Y2T2 418 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 L3MBTL1Q9Y468 752 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 PCDHB14Q9Y5E9 798 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 PCDHGA7Q9Y5G6 932 aa15.85■□□□□ 0.13
SNX1-203ENST00000558040 IGLV3-12A0A075B6K2 115 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 CFAP73A6NFT4 308 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 C9J4A7 227 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 GSC2O15499 205 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 STK17BO94768 372 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 SLITRK5O94991 958 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 ALBP02768 609 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 GSNP06396 782 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 SOAT1P35610 550 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 PGM1P36871 562 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 ERV3-1Q14264 604 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 RSPO4Q2I0M5 234 aaPredicted RBP15.84■□□□□ 0.13
SNX1-203ENST00000558040 MINDY4Q4G0A6 757 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 OVCH1Q7RTY7 1134 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 ZNF551Q7Z340 670 aaPredicted RBP15.84■□□□□ 0.13
SNX1-203ENST00000558040 SCUBE1Q8IWY4 988 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 OR4N5Q8IXE1 308 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 CCDC116Q8IYX3 515 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 KIF2BQ8N4N8 673 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 PSMA8Q8TAA3 256 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 SUN3Q8TAQ9 357 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 PMEPA1Q969W9 287 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 ANKRD27Q96NW4 1050 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 RAB3IPQ96QF0 476 aaPredicted RBP15.84■□□□□ 0.13
SNX1-203ENST00000558040 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 SLC39A3Q9BRY0 314 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 THTPAQ9BU02 230 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 LANCL2Q9NS86 450 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 ADA2Q9NZK5 511 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 VAPAQ9P0L0 249 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 GPN3Q9UHW5 284 aaPredicted RBP15.84■□□□□ 0.13
SNX1-203ENST00000558040 CORO2BQ9UQ03 480 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 PCDHGA8Q9Y5G5 932 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 FRYLO94915 3013 aa15.84■□□□□ 0.13
SNX1-203ENST00000558040 TRBV5-3A0A0A0MS03 114 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 EVPLLA8MZ36 301 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 OR10H2O60403 315 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 ATP1B1P05026 303 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SLC35E2P0CK97 266 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 HOXB9P17482 250 aaPredicted RBP15.83■□□□□ 0.12
SNX1-203ENST00000558040 UQCRC2P22695 453 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SLC6A2P23975 617 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 PTPN6P29350 595 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
SNX1-203ENST00000558040 SLC7A2P52569 658 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 IGLV3-21P80748 117 aaPredicted RBP15.83■□□□□ 0.12
SNX1-203ENST00000558040 ID2Q02363 134 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 ZNF750Q32MQ0 723 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SPDYE7PQ495Y7 208 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 RUNDC3AQ59EK9 446 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 C6orf163Q5TEZ5 329 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 NANOGP8Q6NSW7 305 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SHISA5Q8N114 240 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 MR1Q95460 341 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 MOAP1Q96BY2 351 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 RNF31Q96EP0 1072 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 CDRT15Q96T59 188 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SLC35A5Q9BS91 424 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 CADM1Q9BY67 442 aaKnown RBP15.83■□□□□ 0.12
SNX1-203ENST00000558040 SLC26A1Q9H2B4 701 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 NANOGQ9H9S0 305 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms