RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KCTD2Q14681 263 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 IMMTQ16891 758 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 SBK1Q52WX2 424 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 BLOC1S2Q6QNY1 142 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ANKRD33Q7Z3H0 272 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 TLK2Q86UE8 772 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 POGLUT1Q8NBL1 392 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ITLN1Q8WWA0 313 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 APOL2Q9BQE5 337 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 RIOK1Q9BRS2 568 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 LLPHQ9BRT6 129 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 YTHDF1Q9BYJ9 559 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 NACAP1Q9BZK3 213 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 MOB1AQ9H8S9 216 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 CD209Q9NNX6 404 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ANKEF1Q9NU02 776 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 AUP1Q9Y679 476 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 FER1L5A0AVI2 2057 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 MYH9P35579 1960 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 OTOFQ9HC10 1997 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 RLFQ13129 1914 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 COL11A1P12107 1806 aaPredicted RBP3.03□□□□□ -1.93
VRK1-207ENST00000557352 WDR90Q96KV7 1748 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 PLIN4Q96Q06 1357 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 MROH7-TTC4A0A0A0MT08 1334 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 A0A1B0GTH9 108 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 SRRM4A7MD48 611 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 IDH1O75874 414 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 UFL1O94874 794 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 VENTXO95231 258 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 OR52Z1P0C646 297 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 CASTP20810 708 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 PTMSP20962 102 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 GIFP27352 417 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 KRT20P35900 424 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 HSD17B3P37058 310 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 GYG1P46976 350 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 CAPZA2P47755 286 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 CSE1LP55060 971 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 PPIAP62937 165 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 NUCB2P80303 420 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 RBPJQ06330 500 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 RBBP7Q16576 425 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 SPANXN4Q5MJ08 99 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 SMIM5Q71RC9 77 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 DEFB132Q7Z7B7 95 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 HIPK1Q86Z02 1210 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 NCOA7Q8NI08 942 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 SNRNP27Q8WVK2 155 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 SEPT1Q8WYJ6 367 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 NABP1Q96AH0 204 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 PYCR2Q96C36 320 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 ZNF274Q96GC6 653 aaPredicted RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 RADILQ96JH8 1075 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 LURAP1Q96LR2 239 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 JAKMIP1Q96N16 626 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 PAPOLGQ9BWT3 736 aaKnown RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 KRT23Q9C075 422 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 STRADBQ9C0K7 418 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 RNF41Q9H4P4 317 aaPredicted RBP3.02□□□□□ -1.93
VRK1-207ENST00000557352 PKD2L2Q9NZM6 624 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 POLLQ9UGP5 575 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 FAM169AQ9Y6X4 670 aa3.02□□□□□ -1.93
VRK1-207ENST00000557352 COL4A5P29400 1685 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 E7EWF7 191 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 TADA2AO75478 443 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 PSMD10O75832 226 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 ANPEPP15144 967 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 MC5RP33032 325 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 BTG1P62324 171 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 HMGN5P82970 282 aaKnown RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 MECOMQ03112 1051 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 TRDNQ13061 729 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 TMEM44Q2T9K0 475 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 C9orf152Q5JTZ5 239 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 FKBP1CQ5VVH2 108 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 KRT39Q6A163 491 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 DMKNQ6E0U4 476 aaPredicted RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 EMBQ6PCB8 327 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 C16orf54Q6UWD8 224 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 STOX1Q6ZVD7 989 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 KRT74Q7RTS7 529 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 C5orf24Q7Z6I8 188 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 SERINC5Q86VE9 423 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 DZIP1Q86YF9 867 aaKnown RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 DND1Q8IYX4 353 aaKnown RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 CCDC63Q8NA47 563 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 RBM41Q96IZ5 413 aaKnown RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 MGME1Q9BQP7 344 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 CRNKL1Q9BZJ0 848 aaKnown RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 NAPBQ9H115 298 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 MARCH7Q9H992 704 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 XAB2Q9HCS7 855 aaKnown RBP3.01□□□□□ -1.93
VRK1-207ENST00000557352 PDRG1Q9NUG6 133 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 IKZF3Q9UKT9 509 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 KIF3AQ9Y496 699 aa3.01□□□□□ -1.93
VRK1-207ENST00000557352 A0A0G2JMZ2 1700 aa3□□□□□ -1.93
VRK1-207ENST00000557352 TRBC2A0A5B9 178 aa3□□□□□ -1.93
VRK1-207ENST00000557352 INPP4BO15327 924 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms