RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ZNF490Q9ULM2 529 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 CHCHD2Q9Y6H1 151 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ARID1AO14497 2285 aa10.92□□□□□ -0.66
ACTN1-221ENST00000556571 ATRQ13535 2644 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 ANKRD33BA6NCL7 494 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 CLGNO14967 610 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 ARHGEF9O43307 516 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 C1QAP02745 245 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 FBXO45P0C2W1 286 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 CD53P19397 219 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 CTSSP25774 331 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 GDF1P27539 372 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 CASQ1P31415 396 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 OPRM1P35372 400 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 MSH2P43246 934 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 WNT3P56703 355 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 IGLV3-21P80748 117 aaPredicted RBP10.91□□□□□ -0.66
ACTN1-221ENST00000556571 ID2Q02363 134 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 CRYZQ08257 329 aaKnown RBP10.91□□□□□ -0.66
ACTN1-221ENST00000556571 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 UBE3DQ7Z6J8 389 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 KRTAP1-3Q8IUG1 177 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 IGDCC3Q8IVU1 814 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 ACOT4Q8N9L9 421 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 OR10G3Q8NGC4 313 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 NUDT8Q8WV74 236 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 PTCD3Q96EY7 689 aaKnown RBP10.91□□□□□ -0.66
ACTN1-221ENST00000556571 DGAT2Q96PD7 388 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 DOHHQ9BU89 302 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 EFCAB11Q9BUY7 163 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 PRDM14Q9GZV8 571 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
ACTN1-221ENST00000556571 EPB41L4BQ9H329 900 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 DNAJC11Q9NVH1 559 aa10.91□□□□□ -0.66
ACTN1-221ENST00000556571 CNOT11Q9UKZ1 510 aaKnown RBP10.91□□□□□ -0.66
ACTN1-221ENST00000556571 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 NINQ8N4C6 2090 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 CD8B2A6NJW9 211 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 KDM4EB2RXH2 506 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 TRIM3O75382 744 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 BANF1O75531 89 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 TRAPPC6AO75865 159 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 SCELO95171 688 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 IL18BPO95998 194 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 HRGP04196 525 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 HIST1H1TP22492 207 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 CPN2P22792 545 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 ATP5A1P25705 553 aaKnown RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 GGT5P36269 586 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 RPL21P46778 160 aaKnown RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 DR1Q01658 176 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 LAPTM5Q13571 262 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 DOC2AQ14183 400 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 TSNQ15631 228 aaKnown RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 HIST2H2ACQ16777 129 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 AP5B1Q2VPB7 878 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 TMEM35AQ53FP2 167 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 VASNQ6EMK4 673 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 HIST2H2AA3Q6FI13 130 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 ADNP2Q6IQ32 1131 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF793Q6ZN11 406 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 SYDE1Q6ZW31 735 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 SLC29A4Q7RTT9 530 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 CREG2Q8IUH2 290 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 OR4N5Q8IXE1 308 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 KLHL7Q8IXQ5 586 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 TCAIMQ8N3R3 496 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 PPWD1Q96BP3 646 aaKnown RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 WDR34Q96EX3 536 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 FBXL20Q96IG2 436 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 VPS39Q96JC1 886 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF597Q96LX8 424 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 DACH2Q96NX9 599 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 CNOT10Q9H9A5 744 aaKnown RBP10.9□□□□□ -0.66
ACTN1-221ENST00000556571 PLAC1Q9HBJ0 212 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 JKAMPQ9P055 326 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 IKBKGQ9Y6K9 419 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 ARHGAP21Q5T5U3 1957 aa10.9□□□□□ -0.66
ACTN1-221ENST00000556571 IQANK1A0A1B0GTG1 560 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 MBD3L4A6NDZ8 208 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 MBD3L3A6NE82 208 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 NCF1BA6NI72 391 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 MBD3L5A6NJ08 208 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 NCF1CA8MVU1 366 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 EEF1E1-BLOC1S5C9J1V9 151 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 CCDC188H7C350 402 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 TP53I11O14683 189 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 TAPBPO15533 448 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 EEF1E1O43324 174 aaKnown RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 FGF17O60258 216 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 PRAMEF4O60810 478 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 SNX4O95219 450 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 LY6G6DO95868 133 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 HPNP05981 417 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 NCF1P14598 390 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 AGFG1P52594 562 aaKnown RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 TAS2R39P59534 338 aa10.89□□□□□ -0.67
ACTN1-221ENST00000556571 ETF1P62495 437 aaKnown RBP10.89□□□□□ -0.67
ACTN1-221ENST00000556571 PLIN5Q00G26 463 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms