RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 Q6ZSR9 355 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 OR4N5Q8IXE1 308 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 CLYBLQ8N0X4 340 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 MMP21Q8N119 569 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 ARMC10Q8N2F6 343 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 APCDD1LQ8NCL9 501 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 B3GNT7Q8NFL0 401 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.01□□□□□ -0.97
SRP54-210ENST00000556380 DNAJB14Q8TBM8 379 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 SH3GL2Q99962 352 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 STMN4Q9H169 189 aaPredicted RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 VIPAS39Q9H9C1 493 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 PRM3Q9NNZ6 103 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 KCNK9Q9NPC2 374 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 ADAP2Q9NPF8 381 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 ZDHHC2Q9UIJ5 367 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 MCM8Q9UJA3 840 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 ZNF223Q9UK11 482 aaPredicted RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 TRAF6Q9Y4K3 522 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 PCDHA9Q9Y5H5 950 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 DNAJC15Q9Y5T4 150 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 PTGDR2Q9Y5Y4 395 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 SPACA6W5XKT8 324 aa9.01□□□□□ -0.97
SRP54-210ENST00000556380 TNRC6AQ8NDV7 1962 aaKnown RBP9.01□□□□□ -0.97
SRP54-210ENST00000556380 A0A1W2PS29 197 aa9□□□□□ -0.97
SRP54-210ENST00000556380 TMEM120BA0PK00 339 aa9□□□□□ -0.97
SRP54-210ENST00000556380 GLOD5A6NK44 160 aa9□□□□□ -0.97
SRP54-210ENST00000556380 EIF4E1BA6NMX2 242 aaKnown RBP9□□□□□ -0.97
SRP54-210ENST00000556380 ITM2AO43736 263 aa9□□□□□ -0.97
SRP54-210ENST00000556380 RSL1D1O76021 490 aaKnown RBP9□□□□□ -0.97
SRP54-210ENST00000556380 MYO1DO94832 1006 aa9□□□□□ -0.97
SRP54-210ENST00000556380 SERPINE1P05121 402 aa9□□□□□ -0.97
SRP54-210ENST00000556380 ALPPP05187 535 aa9□□□□□ -0.97
SRP54-210ENST00000556380 NR2F6P10588 404 aa9□□□□□ -0.97
SRP54-210ENST00000556380 TLX1P31314 330 aaPredicted RBP9□□□□□ -0.97
SRP54-210ENST00000556380 BUD31P41223 144 aaPredicted RBP9□□□□□ -0.97
SRP54-210ENST00000556380 STT3AP46977 705 aa9□□□□□ -0.97
SRP54-210ENST00000556380 MAPK12P53778 367 aa9□□□□□ -0.97
SRP54-210ENST00000556380 AP2B1P63010 937 aa9□□□□□ -0.97
SRP54-210ENST00000556380 FOLH1Q04609 750 aa9□□□□□ -0.97
SRP54-210ENST00000556380 C19orf57Q0VDD7 668 aa9□□□□□ -0.97
SRP54-210ENST00000556380 STX4Q12846 297 aa9□□□□□ -0.97
SRP54-210ENST00000556380 KLRB1Q12918 225 aa9□□□□□ -0.97
SRP54-210ENST00000556380 BIKQ13323 160 aa9□□□□□ -0.97
SRP54-210ENST00000556380 CHI3L2Q15782 390 aa9□□□□□ -0.97
SRP54-210ENST00000556380 PLEKHN1Q494U1 663 aaPredicted RBP9□□□□□ -0.97
SRP54-210ENST00000556380 NADK2Q4G0N4 442 aa9□□□□□ -0.97
SRP54-210ENST00000556380 SPIN4Q56A73 249 aa9□□□□□ -0.97
SRP54-210ENST00000556380 Q6ZS92 163 aa9□□□□□ -0.97
SRP54-210ENST00000556380 HDXQ7Z353 690 aa9□□□□□ -0.97
SRP54-210ENST00000556380 TMEM132CQ8N3T6 1108 aa9□□□□□ -0.97
SRP54-210ENST00000556380 KIF2BQ8N4N8 673 aa9□□□□□ -0.97
SRP54-210ENST00000556380 SIRT6Q8N6T7 355 aa9□□□□□ -0.97
SRP54-210ENST00000556380 Q8NA96 180 aa9□□□□□ -0.97
SRP54-210ENST00000556380 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
SRP54-210ENST00000556380 OR2T11Q8NH01 316 aa9□□□□□ -0.97
SRP54-210ENST00000556380 FAM76AQ8TAV0 307 aa9□□□□□ -0.97
SRP54-210ENST00000556380 METTL2AQ96IZ6 378 aaKnown RBP9□□□□□ -0.97
SRP54-210ENST00000556380 FCRL1Q96LA6 429 aa9□□□□□ -0.97
SRP54-210ENST00000556380 C20orf27Q9GZN8 174 aa9□□□□□ -0.97
SRP54-210ENST00000556380 EML4Q9HC35 981 aaKnown RBP9□□□□□ -0.97
SRP54-210ENST00000556380 PNO1Q9NRX1 252 aaKnown RBP9□□□□□ -0.97
SRP54-210ENST00000556380 ARGLU1Q9NWB6 273 aaPredicted RBP9□□□□□ -0.97
SRP54-210ENST00000556380 PTGFRNQ9P2B2 879 aa9□□□□□ -0.97
SRP54-210ENST00000556380 HEY2Q9UBP5 337 aa9□□□□□ -0.97
SRP54-210ENST00000556380 HAO1Q9UJM8 370 aa9□□□□□ -0.97
SRP54-210ENST00000556380 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
SRP54-210ENST00000556380 GOLGA6L10A6NI86 522 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 TMEM200CA6NKL6 621 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 A8MUI8 341 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SLC28A1O00337 649 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 PCDH7O60245 1069 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 DPM1O60762 260 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 CRCPO75575 148 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 LYPLA1O75608 230 aaPredicted RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 SASH3O75995 380 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SORBS2O94875 1100 aaKnown RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 IGKV3-11P04433 115 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SLC35E2P0CK97 266 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ALOX15P16050 662 aaPredicted RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 BGNP21810 368 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 GRK2P25098 689 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 TIA1P31483 386 aaKnown RBP eCLIP8.99□□□□□ -0.97
SRP54-210ENST00000556380 GALNSP34059 522 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 CASRP41180 1078 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 GSK3AP49840 483 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ABCE1P61221 599 aaKnown RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 BTKQ06187 659 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ACSM2AQ08AH3 577 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 TTMPQ5BVD1 217 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 COLEC12Q5KU26 742 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ACER2Q5QJU3 275 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SH2D4BQ5SQS7 431 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 IRAK1BP1Q5VVH5 260 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ACSM2BQ68CK6 577 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 FCRLBQ6BAA4 426 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 OR52E8Q6IFG1 317 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 NOXRED1Q6NXP6 359 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SLC48A1Q6P1K1 146 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 LINC00696Q6ZRV3 163 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms