RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZNF23P17027 643 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 EFNA1P20827 205 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CD27P26842 260 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CAPGP40121 348 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 DCTP40126 519 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CRATP43155 626 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SSR2P43308 183 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PRIM2P49643 509 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CRYBA2P53672 197 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 MANFP55145 182 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PCBP3P57721 371 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SELENOWP63302 87 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SLAMF1Q13291 335 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 GK3PQ14409 553 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 C16orf72Q14CZ0 275 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CEBPEQ15744 281 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 RFX4Q33E94 735 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 KCTD21Q4G0X4 260 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 OR2T5Q6IEZ7 315 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SHQ1Q6PI26 577 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 TBPL2Q6SJ96 375 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 TMEM64Q6YI46 380 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 ZNF793Q6ZN11 406 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 VN1R4Q7Z5H5 301 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PATL1Q86TB9 770 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 ASPGQ86U10 573 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 STK32CQ86UX6 486 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PLD3Q8IV08 490 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 ZDHHC21Q8IVQ6 265 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 ZC3H7AQ8IWR0 971 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SDR16C5Q8N3Y7 309 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 OR2T29Q8NH02 315 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 MAGEE2Q8TD90 523 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 RSC1A1Q92681 617 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SDCCAG3Q96C92 435 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SMIM10Q96HG1 83 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 C7orf34Q96L11 122 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 TRAPPC9Q96Q05 1148 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 OR2A5Q96R48 311 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 RBM4BQ9BQ04 359 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 RBM4Q9BWF3 364 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 GPR174Q9BXC1 333 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 MRPS26Q9BYN8 205 aaKnown RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 EPB41L1Q9H4G0 881 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 KLHL31Q9H511 634 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CXorf36Q9H7Y0 433 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 UCK1Q9HA47 277 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 LTB4R2Q9NPC1 389 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 A4GALTQ9NPC4 353 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SLC35C2Q9NQQ7 365 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SIRT3Q9NTG7 399 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CPNE7Q9UBL6 633 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PILRAQ9UKJ1 303 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 CES1P1Q9UKY3 287 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 BAG5Q9UL15 447 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 PADI2Q9Y2J8 665 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 AK5Q9Y6K8 562 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 V9GYQ6 96 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 BRWD1Q9NSI6 2320 aa7.85□□□□□ -1.15
ATXN3-235ENST00000556082 SMIM31A0A1B0GVY4 71 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 A0A1W2PR48 441 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 URADA6NGE7 173 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TRIM64CA6NLI5 447 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 C2orf74A8MZ97 194 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ERI3O43414 337 aaKnown RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 PROM1O43490 865 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TIAF1O95411 115 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ZNF682O95780 498 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 MT-ND1P03886 318 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 NTRK1P04629 796 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 FABP3P05413 133 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 LINGO3P0C6S8 592 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 SMIM18P0DKX4 95 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 THRBP10828 461 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ETFAP13804 333 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 UGT2B7P16662 529 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 DNAJA1P31689 397 aaKnown RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 CHI3L1P36222 383 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 RPL5P46777 297 aaKnown RBP7.84□□□□□ -1.15
ATXN3-235ENST00000556082 RPS6KA3P51812 740 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ARHGDIAP52565 204 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 PLA2G16P53816 162 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 ITGA1P56199 1179 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TUBA4AP68366 448 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 KCNJ10P78508 379 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 CDK6Q00534 326 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 RGS1Q08116 209 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 APOFQ13790 326 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 SCARB2Q14108 478 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 SPIDRQ14159 915 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 GPR18Q14330 331 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TOR1AIP1Q5JTV8 583 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TMEM31Q5JXX7 168 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 NDUFAF5Q5TEU4 345 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 TTC23Q5W5X9 447 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 KRT80Q6KB66 452 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 REEP3Q6NUK4 255 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 BHLHB9Q6PI77 547 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 FIGLAQ6QHK4 219 aa7.84□□□□□ -1.15
ATXN3-235ENST00000556082 C6orf120Q7Z4R8 191 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms