RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MSX1P28360 303 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 TLX1P31314 330 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 BUD31P41223 144 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 DNASE1L1P49184 302 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 IRF9Q00978 393 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 TBL3Q12788 808 aaKnown RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ASPHQ12797 758 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 FAM83EQ2M2I3 478 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ZNF791Q3KP31 576 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 GXYLT1Q4G148 440 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 MYLK4Q86YV6 388 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 OR4N5Q8IXE1 308 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 DND1Q8IYX4 353 aaKnown RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ST13P4Q8IZP2 240 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 RNF175Q8N4F7 328 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 SLC15A4Q8N697 577 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 REPS1Q96D71 796 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 MTERF1Q99551 399 aaKnown RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ZNF717Q9BY31 904 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ACTR8Q9H981 624 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 LYARQ9NX58 379 aaKnown RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 TUBA8Q9NY65 449 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ANGPTL3Q9Y5C1 460 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 NKX2-6A6NCS4 301 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 KLK8O60259 260 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 SUSD5O60279 629 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 TOXO94900 526 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 NADKO95544 446 aaPredicted RBP18.21■□□□□ 0.51
PRKCH-219ENST00000555906 GFAPP14136 432 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 ALDH18A1P54886 795 aaKnown RBP18.21■□□□□ 0.51
PRKCH-219ENST00000555906 GUCY2DQ02846 1103 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 PMPCAQ10713 525 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 C18orf63Q68DL7 685 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 LYPD8Q6UX82 237 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 ZNF572Q7Z3I7 529 aaPredicted RBP18.21■□□□□ 0.51
PRKCH-219ENST00000555906 CDH24Q86UP0 819 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 PAQR8Q8TEZ7 354 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 SPACA9Q96E40 222 aaPredicted RBP18.21■□□□□ 0.51
PRKCH-219ENST00000555906 RBM18Q96H35 190 aaKnown RBP18.21■□□□□ 0.51
PRKCH-219ENST00000555906 ZNF703Q9H7S9 590 aaPredicted RBP18.21■□□□□ 0.51
PRKCH-219ENST00000555906 KCNJ16Q9NPI9 418 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 SNX15Q9NRS6 342 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 C2CD3Q4AC94 2353 aa18.21■□□□□ 0.51
PRKCH-219ENST00000555906 A0A0A6YYD5 115 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 HRKO00198 91 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 PRKRAO75569 313 aaKnown RBP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 C2P06681 752 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 NR2F6P10588 404 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 CASQ1P31415 396 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 PIK3CGP48736 1102 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 RPS13P62277 151 aaKnown RBP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 CUL3Q13618 768 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 ACAP2Q15057 778 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 PCBP2Q15366 365 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 TRADDQ15628 312 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 PFKFB4Q16877 469 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 MROH9Q5TGP6 573 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 MRM1Q6IN84 353 aaKnown RBP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 METTL2BQ6P1Q9 378 aaKnown RBP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 ADGRD1Q6QNK2 874 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 B3GNT6Q6ZMB0 384 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 DGAT2L6Q6ZPD8 337 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 CCDC71Q8IV32 467 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 OR5M9Q8NGP3 310 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 CNPPD1Q9BV87 410 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 BOKQ9UMX3 212 aaPredicted RBP18.2■□□□□ 0.5
PRKCH-219ENST00000555906 FAM215AQ9Y5M1 114 aa18.2■□□□□ 0.5
PRKCH-219ENST00000555906 HMX2A2RU54 273 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 PROM1O43490 865 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 HCN1O60741 890 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 WDR1O75083 606 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 CELA3AP09093 270 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 PTX3P26022 381 aaPredicted RBP18.19■□□□□ 0.5
PRKCH-219ENST00000555906 MAN2A2P49641 1150 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 SERPINB8P50452 374 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 HERVK_113P63132 956 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 ERVK-8P63133 956 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 SLC22A10Q63ZE4 541 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 ZNF585AQ6P3V2 769 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 KLC3Q6P597 504 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 RNF111Q6ZNA4 994 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 SLC29A4Q7RTT9 530 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 GOLGA7Q7Z5G4 137 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 NUDT13Q86X67 352 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 FBXW8Q8N3Y1 598 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 L3MBTL4Q8NA19 623 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 PPWD1Q96BP3 646 aaKnown RBP18.19■□□□□ 0.5
PRKCH-219ENST00000555906 SARAFQ96BY9 339 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 TTYH2Q9BSA4 534 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 ERVK-6Q9BXR3 956 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 UCK2Q9BZX2 261 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 WWTR1Q9GZV5 400 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 DDX31Q9H8H2 851 aaKnown RBP18.19■□□□□ 0.5
PRKCH-219ENST00000555906 ERVK-19Q9WJR5 959 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 ASB4Q9Y574 426 aa18.19■□□□□ 0.5
PRKCH-219ENST00000555906 TNPO3Q9Y5L0 923 aaKnown RBP18.19■□□□□ 0.5
PRKCH-219ENST00000555906 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.19■□□□□ 0.5
PRKCH-219ENST00000555906 ANKHD1Q8IWZ3 2542 aaKnown RBP18.18■□□□□ 0.5
PRKCH-219ENST00000555906 NINQ8N4C6 2090 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms