RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 OR14J1Q9UGF5 321 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 HMX3A6NHT5 357 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 K7EPK0 472 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CYB5BO43169 146 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ADORA3P0DMS8 318 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 MGST1P10620 155 aaKnown RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CPOXP36551 454 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF829Q3KNS6 432 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PLEKHN1Q494U1 663 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 C6orf120Q7Z4R8 191 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FAM71E2Q8N5Q1 922 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR51Q1Q8NH59 317 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 GTF2H4Q92759 462 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 RSPRY1Q96DX4 576 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SPEF2Q9C093 1822 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 C2orf74A8MZ97 194 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 GOSR2O14653 212 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 EI24O14681 340 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR12D1P0DN82 309 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 HTR7P34969 479 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ALDH3B2P48448 385 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TLE1Q04724 770 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 BRAT1Q6PJG6 821 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ERVK13-1Q9NX77 482 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 KLHL13Q9P2N7 655 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF223Q9UK11 482 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 RNF6Q9Y252 685 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 RIPK3Q9Y572 518 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 MTMR11A4FU01 709 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ARL6IP5O75915 188 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 YES1P07947 543 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 XRCC1P18887 633 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PRDX6P30041 224 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FRKP42685 505 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 NRROSQ86YC3 692 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PI4KAP42356 2102 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 INTS1Q8N201 2190 aaKnown RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 H7C1Q1 480 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 POLR1CO15160 346 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CSTAP01040 98 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 IL32P24001 234 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CDK2P24941 298 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 NKPD1Q17RQ9 610 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM198Q66K66 360 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR9A4Q8NGU2 314 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 C2orf15Q8WU43 125 aaKnown RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FBXW5Q969U6 566 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TMBIM1Q969X1 311 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FAM46BQ96A09 425 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SFXN2Q96NB2 322 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM209Q96SK2 561 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 IL25Q9H293 177 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 NLGN3Q9NZ94 848 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FZD10Q9ULW2 581 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CAMK2AQ9UQM7 478 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 WDR45Q9Y484 360 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 UBIAD1Q9Y5Z9 338 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FAM186AA6NE01 2351 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CADP27708 2225 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 A0A1W2PP55 124 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CAPN5O15484 640 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 RGS9O75916 674 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ACVRL1P37023 503 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 YBEYP58557 167 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 HERC3Q15034 1050 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FRG2Q64ET8 278 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PAQR3Q6TCH7 311 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TPRA1Q86W33 373 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR13C4Q8NGS5 318 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TFGQ92734 400 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FRG2BQ96QU4 278 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 MCHR1Q99705 422 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SGIP1Q9BQI5 828 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 URM1Q9BTM9 101 aaKnown RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 JUNDP17535 347 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ACVR1BP36896 505 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 KIAA0319Q5VV43 1072 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 GARNL3Q5VVW2 1013 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TPRG1Q6ZUI0 275 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SH3RF1Q7Z6J0 888 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 BEST3Q8N1M1 668 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR51T1Q8NGJ9 327 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR51G2Q8NGK0 314 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF675Q8TD23 568 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ZDHHC1Q8WTX9 485 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 MSANTD3Q96H12 275 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PLSCR5A0PG75 271 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TULP2O00295 520 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CREBL2O60519 120 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TOXO94900 526 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ASGR2P07307 311 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 BDKRB2P30411 391 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CAV2P51636 162 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CSNK2A1P68400 391 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TRAM2Q15035 370 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SF3A2Q15428 464 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms