RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 AKR1A1P14550 325 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 CDC42P60953 191 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 RPL6Q02878 288 aaKnown RBP14.93□□□□□ -0.02
SYNE3-203ENST00000554873 PLA1AQ53H76 456 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 SGO1Q5FBB7 561 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 ZNF551Q7Z340 670 aaPredicted RBP14.93□□□□□ -0.02
SYNE3-203ENST00000554873 SERPINA11Q86U17 422 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 STPG2Q8N412 459 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 OR10G2Q8NGC3 310 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 TMEM163Q8TC26 289 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 ACTR10Q9NZ32 417 aa14.93□□□□□ -0.02
SYNE3-203ENST00000554873 PQLC2LA1A4F0 135 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 RGS14O43566 566 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 MPZL2O60487 215 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 TLR5O60602 858 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 CXCL3P19876 107 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 CRYZQ08257 329 aaKnown RBP14.92□□□□□ -0.02
SYNE3-203ENST00000554873 MLLT11Q13015 90 aaPredicted RBP14.92□□□□□ -0.02
SYNE3-203ENST00000554873 C22orf42Q6IC83 251 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 SUSD1Q6UWL2 747 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 CCDC36Q8IYA8 594 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 OTUB1Q96FW1 271 aaPredicted RBP14.92□□□□□ -0.02
SYNE3-203ENST00000554873 ZIC5Q96T25 663 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 POLR2J2Q9GZM3 115 aaKnown RBP14.92□□□□□ -0.02
SYNE3-203ENST00000554873 SERHLQ9NQF3 203 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 PFDN2Q9UHV9 154 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 TRAV20A0A0B4J274 112 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 HRGP04196 525 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 LRRC32Q14392 662 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 GPR176Q14439 515 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 CCDC85BQ15834 202 aaPredicted RBP14.92□□□□□ -0.02
SYNE3-203ENST00000554873 CTXN3Q4LDR2 81 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 DOK6Q6PKX4 331 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 KCTD7Q96MP8 289 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 OR2M2Q96R28 347 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 MND1Q9BWT6 205 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 OR51J1Q9H342 316 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 CLEC2DQ9UHP7 191 aa14.92□□□□□ -0.02
SYNE3-203ENST00000554873 LGALS8O00214 317 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 TNFRSF11BO00300 401 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 SSX5O60225 188 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 SNAPINO95295 136 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 PRAMEF12O95522 483 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 CSKP41240 450 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 CENPAP49450 140 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 EVX1P49640 407 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 DSC1Q08554 894 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 PPIGQ13427 754 aaKnown RBP eCLIP14.91□□□□□ -0.02
SYNE3-203ENST00000554873 TSC22D1Q15714 1073 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 VMACQ2NL98 169 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 PABPC1L2AQ5JQF8 200 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 CDKL4Q5MAI5 379 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 LIPKQ5VXJ0 399 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 PDE12Q6L8Q7 609 aaKnown RBP14.91□□□□□ -0.02
SYNE3-203ENST00000554873 USP7Q93009 1102 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 C7orf34Q96L11 122 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 KATNB1Q9BVA0 655 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 SLC6A14Q9UN76 642 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 H7C0S8 307 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 IGHA2P01877 340 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 FGF2P09038 288 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 HOXB9P17482 250 aaPredicted RBP14.91□□□□□ -0.02
SYNE3-203ENST00000554873 C4BPBP20851 252 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 SPDYE7PQ495Y7 208 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 USP45Q70EL2 814 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 RGL4Q8IZJ4 473 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 EID2BQ96D98 161 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 CXorf58Q96LI9 332 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 SLC38A2Q96QD8 506 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 INPP5KQ9BT40 448 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 IER2Q9BTL4 223 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 ADGRE3Q9BY15 652 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 CIPCQ9C0C6 399 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 CDCP1Q9H5V8 836 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 ESRP2Q9H6T0 727 aaKnown RBP14.91□□□□□ -0.02
SYNE3-203ENST00000554873 KCTD5Q9NXV2 234 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 SCP2D1Q9UJQ7 156 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 TINAGQ9UJW2 476 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 KCNK7Q9Y2U2 307 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 ASB4Q9Y574 426 aa14.91□□□□□ -0.02
SYNE3-203ENST00000554873 MEIKINA0A087WXM9 373 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 HPGDSO60760 199 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 ULK1O75385 1050 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 STK19P49842 368 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-203ENST00000554873 CDH4P55283 916 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 ADAM15Q13444 863 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 ATRAIDQ6UW56 229 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 KANSL1Q7Z3B3 1105 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 TMPRSS9Q7Z410 1059 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 RTN4RL1Q86UN2 441 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-203ENST00000554873 BVESQ8NE79 360 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 NELL2Q99435 816 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 SEPT5Q99719 369 aaPredicted RBP14.9□□□□□ -0.02
SYNE3-203ENST00000554873 DPH7Q9BTV6 452 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 SORBS1Q9BX66 1292 aaKnown RBP14.9□□□□□ -0.02
SYNE3-203ENST00000554873 GPR63Q9BZJ6 419 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 TMEM184CQ9NVA4 438 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 PPIEQ9UNP9 301 aaKnown RBP14.9□□□□□ -0.02
SYNE3-203ENST00000554873 MPTX1A8MV57 137 aa14.9□□□□□ -0.02
SYNE3-203ENST00000554873 H7C2Y5 167 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms