RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NEDD8-MDP1E9PL57 170 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 SH2D1BO14796 132 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RASGRF2O14827 1237 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 KIAA0513O60268 411 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 NME2P1O60361 137 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 AKR7A3O95154 331 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 IFNB1P01574 187 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 CXCL10P02778 98 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 HPDP32754 393 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 TRIM23P36406 574 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 TAF6P49848 677 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RAG2P55895 527 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RPS4XP62701 263 aaKnown RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 MFGE8Q08431 387 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 SPP2Q13103 211 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF177Q13360 481 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ITPK1Q13572 414 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 GCKRQ14397 625 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RFTN1Q14699 578 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 MEF2DQ14814 521 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 NECTIN1Q15223 517 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 P2RY14Q15391 338 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ZKSCAN8Q15776 578 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 CLPPQ16740 277 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 KNOP1Q1ED39 458 aaKnown RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RFTN2Q52LD8 501 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 HERC4Q5GLZ8 1057 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 TCHHL1Q5QJ38 904 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 FAAP20Q6NZ36 180 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF613Q6PF04 617 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 FRRS1Q6ZNA5 592 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 MCM10Q7L590 875 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 CATSPER4Q7RTX7 472 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 LRRC17Q8N6Y2 441 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ANKRD20A12PQ8NF67 263 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 C8orf46Q8TAG6 207 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 PHYHIPQ92561 330 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 FCGR1BQ92637 280 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF689Q96CS4 500 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 MOCOSQ96EN8 888 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 NSMCE3Q96MG7 304 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 TNFRSF13CQ96RJ3 184 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RAB40CQ96S21 281 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 SYT11Q9BT88 431 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 MCRIP2Q9BUT9 160 aaKnown RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 RAB17Q9H0T7 212 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 MED20Q9H944 212 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 LIN28AQ9H9Z2 209 aaKnown RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 WDR41Q9HAD4 459 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 HPS4Q9NQG7 708 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 TEX10Q9NXF1 929 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 THEGQ9P2T0 379 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 THAP10Q9P2Z0 257 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 ERVK-18Q9QC07 812 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 KLHDC2Q9Y2U9 406 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 KLF2Q9Y5W3 355 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 UMODL1Q5DID0 1318 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 IGLV7-46A0A075B6I9 117 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 IGHV3-20A0A0C4DH32 117 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 LOC390937A0A1W2PQ73 354 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 MEX3AA1L020 520 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 K7EQD1 137 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 K7ERI5 159 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 INPP4BO15327 924 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 TNFSF12O43508 249 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 DCXO43602 365 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 SMPD2O60906 423 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 DUSP11O75319 330 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 CEACAM4O75871 244 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 NXPH4O95158 308 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 MYOGP15173 224 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 DPEP1P16444 411 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 IL10P22301 178 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 FCARP24071 287 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 EDNRAP25101 427 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 PTPN4P29074 926 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 ABCE1P61221 599 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 GABPB1Q06547 395 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 HSPA14Q0VDF9 509 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 SLC17A1Q14916 467 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 MLF2Q15773 248 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 AGKQ53H12 422 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 HIST2H2AA3Q6FI13 130 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 RAET1GQ6H3X3 334 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 IRGCQ6NXR0 463 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 STEAP1BQ6NZ63 245 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 LCLAT1Q6UWP7 414 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 UNC5DQ6UXZ4 953 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 RBM43Q6ZSC3 357 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 ERASQ7Z444 233 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 YRDCQ86U90 279 aaKnown RBP2.59□□□□□ -1.99
SCFD1-213ENST00000554776 LINC00518Q8N0U6 118 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 ZBTB44Q8NCP5 570 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 TCP11Q8WWU5 503 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 TAF4BQ92750 862 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 P3H4Q92791 437 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 TMEM45BQ96B21 275 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 RAB3CQ96E17 227 aa2.59□□□□□ -1.99
SCFD1-213ENST00000554776 CBWD1Q9BRT8 395 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms