RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ZNF621Q6ZSS3 439 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 GRASPQ7Z6J2 395 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 TRIM48Q8IWZ4 208 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 DTX3Q8N9I9 347 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 DENND6BQ8NEG7 585 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CSGALNACT1Q8TDX6 532 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 AP2M1Q96CW1 435 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 RSPRY1Q96DX4 576 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 KCNC2Q96PR1 638 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 EPYCQ99645 322 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 MGLLQ99685 303 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 GTPBP2Q9BX10 602 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ASPNQ9BXN1 380 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SIRT5Q9NXA8 310 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ING3Q9NXR8 418 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 NFKBIL1Q9UBC1 381 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 LRRK1Q38SD2 2015 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 GABRR3A8MPY1 467 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SEC14L5O43304 696 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 EFCAB14O75071 495 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ACADMP11310 421 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 COX7A2P14406 83 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CBLP22681 906 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 AZGP1P25311 298 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■□□□□ 9.6
SHMT2-207ENST00000553837 RPS19P39019 145 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CRYBA2P53672 197 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ITGA1P56199 1179 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 VLDLRP98155 873 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SDE2Q6IQ49 451 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 GRHL2Q6ISB3 625 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SERPINA11Q86U17 422 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ATCAYQ86WG3 371 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 C1orf52Q8N6N3 182 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 OR56A3Q8NH54 315 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 POF1BQ8WVV4 589 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 TMEM159Q96B96 161 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 COQ8BQ96D53 544 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 REPS1Q96D71 796 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CCM2Q9BSQ5 444 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CNPPD1Q9BV87 410 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CDCA4Q9BXL8 241 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 PRRG3Q9BZD7 231 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SGK2Q9HBY8 427 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 MARK1Q9P0L2 795 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 MAPRE3Q9UPY8 281 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 EXO1Q9UQ84 846 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CMAHPQ9Y471 501 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ANTXRLA6NF34 631 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 H0YIV9 168 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 H3BUI4 141 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 AKR7A2O43488 359 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 UGDHO60701 494 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 SERPINI2O75830 405 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 PDGFAP04085 211 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 CYP17A1P05093 508 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 ELFN1P0C7U0 828 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 IFI30P13284 250 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 GPX2P18283 190 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 PSPHP78330 225 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 RHAGQ02094 409 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 KCNC3Q14003 757 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 CAMK1Q14012 370 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 DHCR24Q15392 516 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 MED22Q15528 200 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 VMACQ2NL98 169 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF284Q2VY69 593 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 ARHGAP15Q53QZ3 475 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 TOR2AQ5JU69 321 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 PDZK1Q5T2W1 519 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 FAM131AQ6UXB0 335 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 GDPGP1Q6ZNW5 385 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 MSANTD1Q6ZTZ1 278 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 SFTPA1Q8IWL2 248 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 FAM9CQ8IZT9 166 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 FAM181AQ8N9Y4 354 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 OR7G3Q8NG95 312 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 OR4M1Q8NGD0 313 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 OR8J2Q8NGG1 315 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 HUS1BQ8NHY5 278 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 ENKURQ8TC29 256 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 SPPL3Q8TCT6 385 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 NEIL2Q969S2 332 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 NXPE3Q969Y0 559 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 C11orf54Q9H0W9 315 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-207ENST00000553837 GLTPQ9NZD2 209 aa11.66□□□□□ -0.54
SHMT2-207ENST00000553837 EIF3KQ9UBQ5 218 aaKnown RBP11.66□□□□□ -0.54
SHMT2-207ENST00000553837 LILRB5O75023 590 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 ATG13O75143 517 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 GPX5O75715 221 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 IFNA16P05015 189 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 HLA-EP13747 358 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 XPAP23025 273 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-207ENST00000553837 KDELR2P33947 212 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 NUDT6P53370 316 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 SRSF11Q05519 484 aaKnown RBP11.65□□□□□ -0.54
SHMT2-207ENST00000553837 SNTA1Q13424 505 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 TP53BP2Q13625 1128 aa11.65□□□□□ -0.54
SHMT2-207ENST00000553837 GPR19Q15760 415 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms