RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TBATAQ96M53 351 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SFXN2Q96NB2 322 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PGLYRP2Q96PD5 576 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 NEU1Q99519 415 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 LGMNQ99538 433 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 EPYCQ99645 322 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 HIST1H2AJQ99878 128 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 TREX2Q9BQ50 279 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MND1Q9BWT6 205 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 BBS2Q9BXC9 721 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 GSDMCQ9BYG8 508 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MED28Q9H204 178 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 OR51J1Q9H342 316 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 EVA1AQ9H8M9 152 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 BARX1Q9HBU1 254 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ISYNA1Q9NPH2 558 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 EXOSC3Q9NQT5 275 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 MBNL3Q9NUK0 354 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 C1orf109Q9NX04 203 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ASIC5Q9NY37 505 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC25A37Q9NYZ2 338 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 GDE1Q9NZC3 331 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 VAPAQ9P0L0 249 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 COPZ2Q9P299 210 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SEC14L3Q9UDX4 400 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 RGS17Q9UGC6 210 aaPredicted RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 NDOR1Q9UHB4 597 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR160Q9UJ42 338 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SPATA2Q9UM82 520 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 ABCG2Q9UNQ0 655 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SF3B6Q9Y3B4 125 aaKnown RBP5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 DMRT1Q9Y5R6 373 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 PTGDR2Q9Y5Y4 395 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SESN1Q9Y6P5 492 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 V9GYQ6 96 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 SIP14410 1827 aa5.04□□□□□ -1.6
LSM3P2-201ENST00000551246 NRXN2Q9P2S2 1712 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TAF1P21675 1872 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 COL5A2P05997 1499 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MEX3AA1L020 520 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 OR2M5A3KFT3 312 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC9B1P1A6NJY1 282 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 GFYI3L273 518 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 M0R233 179 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 LGALS8O00214 317 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SULT1C2O00338 296 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 E2F3O00716 465 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 WNT9AO14904 365 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ADAM12O43184 909 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TGM5O43548 720 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MFSD11O43934 449 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SCN2BO60939 215 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 TSC22D2O75157 780 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PRKRAO75569 313 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 POP7O75817 140 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SC5DO75845 299 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CCNB2O95067 398 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF205O95201 554 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SIX3O95343 332 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 DHFRP00374 187 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MT-CO1P00395 513 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 HMBSP08397 361 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 BPIP17213 487 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 RHCEP18577 417 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CXCL2P19875 107 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CXCL3P19876 107 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 C4BPBP20851 252 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 DNASE1P24855 282 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ATP5A1P25705 553 aaKnown RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 STOMP27105 288 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 FGF9P31371 208 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ADRA1AP35348 466 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 AVPR1AP37288 418 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 POU3F4P49335 361 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 STK19P49842 368 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 AKR1D1P51857 326 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 JAK3P52333 1124 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MTPNP58546 118 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ZP1P60852 638 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 AP1S1P61966 158 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 E2F1Q01094 437 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC6A3Q01959 620 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 EGR3Q06889 387 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 IL10RBQ08334 325 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 C2orf80Q0P641 193 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 ST3GAL4Q11206 333 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 IFRD2Q12894 506 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 MLLT11Q13015 90 aaPredicted RBP5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PLD1Q13393 1074 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 OLIG2Q13516 323 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 CDH18Q13634 790 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 KCTD2Q14681 263 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 NCF4Q15080 339 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PGM5Q15124 567 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 PTPRRQ15256 657 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SURF1Q15526 300 aa5.03□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC10A6Q3KNW5 377 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms