RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CEP78Q5JTW2 689 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ZNF776Q68DI1 518 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 CCDC137Q6PK04 289 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 FIGLAQ6QHK4 219 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RFLNAQ6ZTI6 216 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 NUP54Q7Z3B4 507 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TRMT11Q7Z4G4 463 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 SPATA19Q7Z5L4 167 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ADCK2Q7Z695 626 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 NOA1Q8NC60 698 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 PRCCQ92733 491 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 RHBDF1Q96CC6 855 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 STAMBPL1Q96FJ0 436 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RAB3IPQ96QF0 476 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 IL12RB2Q99665 862 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 OMDQ99983 421 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TUBB2BQ9BVA1 445 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 FICDQ9BVA6 458 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CARD6Q9BX69 1037 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 POLR1EQ9GZS1 481 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 NEUROG2Q9H2A3 272 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 DPH5Q9H2P9 285 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CHMP1AQ9HD42 196 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 FZD3Q9NPG1 666 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TMEM45AQ9NWC5 275 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 DONSONQ9NYP3 566 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SUN2Q9UH99 717 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SLC24A2Q9UI40 661 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RAI2Q9Y5P3 530 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ZFHX2Q9C0A1 2572 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 BCLAF3A2AJT9 711 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 CCL22O00626 93 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ATG13O75143 517 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 BANF1O75531 89 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 GSRP00390 522 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 KRT14P02533 472 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SNRNP70P08621 437 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 P2RY2P41231 377 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RAB28P51157 221 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 BCL2L1Q07817 233 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 FAM27E3Q08E93 113 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 PTPRCAPQ14761 206 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 COLEC12Q5KU26 742 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 C6orf10Q5SRN2 563 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ANKRD22Q5VYY1 191 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SEL1L3Q68CR1 1132 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RAB12Q6IQ22 244 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 DUS1LQ6P1R4 473 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 GDPD4Q6W3E5 623 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 Q6ZPA2 131 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ERN2Q76MJ5 926 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 SPATA21Q7Z572 469 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TSPAN33Q86UF1 283 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TEX26Q8N6G2 289 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SPATA4Q8NEY3 305 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 PRSS33Q8NF86 280 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SPATA13Q96N96 652 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 FNDC11Q9BVV2 318 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 GPR174Q9BXC1 333 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 C6orf106Q9H6K1 298 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 MBNL1Q9NR56 388 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 RHCGQ9UBD6 479 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TINAGQ9UJW2 476 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 V9GYY5 206 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 CKAP5Q14008 2032 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RIF1Q5UIP0 2472 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 HACD1B0YJ81 288 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RAD51CO43502 376 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 LDB2O43679 373 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RNASEH1O60930 286 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 POP4O95707 220 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 F7P08709 466 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 SP9P0CG40 484 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 TDGF1P13385 188 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 PTGER3P43115 390 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CRADDP78560 199 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SLC20A2Q08357 652 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 XRCC4Q13426 336 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 FOXE3Q13461 319 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 PPP1R7Q15435 360 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 VWC2Q2TAL6 325 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 BZW1Q7L1Q6 419 aaKnown RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 BBS5Q8N3I7 341 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 OR2AJ1Q8NGZ0 328 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 NAT14Q8WUY8 206 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 SGCDQ92629 289 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ORAI1Q96D31 301 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ZNF599Q96NL3 588 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 PKP4Q99569 1192 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CMKLR1Q99788 373 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 GBA3Q9H227 469 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 KCNK15Q9H427 330 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ATP13A3Q9H7F0 1226 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 RRAGDQ9NQL2 400 aaPredicted RBP3.57□□□□□ -1.84
APAF1-208ENST00000549007 P4HTMQ9NXG6 502 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 CNIH4Q9P003 139 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 ASIC3Q9UHC3 531 aa3.57□□□□□ -1.84
APAF1-208ENST00000549007 IGHV1OR15-9A0A0B4J2B8 117 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms