RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 LAX1Q8IWV1 398 aa15□□□□□ -0.01
LDLR-204ENST00000545707 FBXO15Q8NCQ5 510 aaPredicted RBP15□□□□□ -0.01
LDLR-204ENST00000545707 MTERF3Q96E29 417 aa15□□□□□ -0.01
LDLR-204ENST00000545707 NEURL3Q96EH8 262 aa15□□□□□ -0.01
LDLR-204ENST00000545707 LRRC3BQ96PB8 259 aa15□□□□□ -0.01
LDLR-204ENST00000545707 POLR2J3Q9H1A7 115 aaKnown RBP15□□□□□ -0.01
LDLR-204ENST00000545707 SMURF1Q9HCE7 757 aa15□□□□□ -0.01
LDLR-204ENST00000545707 TM7SF3Q9NS93 570 aa15□□□□□ -0.01
LDLR-204ENST00000545707 SEMA3GQ9NS98 782 aa15□□□□□ -0.01
LDLR-204ENST00000545707 TMEM39AQ9NV64 488 aa15□□□□□ -0.01
LDLR-204ENST00000545707 A8MV72 311 aaPredicted RBP15□□□□□ -0.01
LDLR-204ENST00000545707 TLX2O43763 284 aaPredicted RBP15□□□□□ -0.01
LDLR-204ENST00000545707 MPZL2O60487 215 aa15□□□□□ -0.01
LDLR-204ENST00000545707 CCNKO75909 580 aa15□□□□□ -0.01
LDLR-204ENST00000545707 DDCP20711 480 aa15□□□□□ -0.01
LDLR-204ENST00000545707 TCEA1P23193 301 aaKnown RBP15□□□□□ -0.01
LDLR-204ENST00000545707 ACADLP28330 430 aa15□□□□□ -0.01
LDLR-204ENST00000545707 CSTF2P33240 577 aaKnown RBP eCLIP15□□□□□ -0.01
LDLR-204ENST00000545707 CRYBB2P43320 205 aa15□□□□□ -0.01
LDLR-204ENST00000545707 ZNF91Q05481 1191 aa15□□□□□ -0.01
LDLR-204ENST00000545707 BAK1Q16611 211 aa15□□□□□ -0.01
LDLR-204ENST00000545707 RSBN1Q5VWQ0 802 aaPredicted RBP15□□□□□ -0.01
LDLR-204ENST00000545707 SAXO2Q658L1 398 aa15□□□□□ -0.01
LDLR-204ENST00000545707 UNC5DQ6UXZ4 953 aa15□□□□□ -0.01
LDLR-204ENST00000545707 FAM129CQ86XR2 697 aa15□□□□□ -0.01
LDLR-204ENST00000545707 KLHL6Q8WZ60 621 aa15□□□□□ -0.01
LDLR-204ENST00000545707 TSSK6Q9BXA6 273 aa15□□□□□ -0.01
LDLR-204ENST00000545707 POLR2J2Q9GZM3 115 aaKnown RBP15□□□□□ -0.01
LDLR-204ENST00000545707 SERHL2Q9H4I8 314 aa15□□□□□ -0.01
LDLR-204ENST00000545707 KCNK12Q9HB15 430 aa15□□□□□ -0.01
LDLR-204ENST00000545707 SLC23A2Q9UGH3 650 aa15□□□□□ -0.01
LDLR-204ENST00000545707 MAFFQ9ULX9 164 aa15□□□□□ -0.01
LDLR-204ENST00000545707 USP34Q70CQ2 3546 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 H7BY64 318 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 PI15O43692 258 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 LZTS3O60299 673 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 ADAP00813 363 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 APOA1P02647 267 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 H1F0P07305 194 aaKnown RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 ADH1AP07327 375 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 OR12D1P0DN82 309 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 C6P13671 934 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 DEFA1P59665 94 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 DEFA3P59666 94 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 ILKQ13418 452 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 TAB1Q15750 504 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 ZNF77Q15935 545 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 PGBD2Q6P3X8 592 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 CASP12Q6UXS9 341 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 KIAA0907Q7Z7F0 614 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 C11orf96Q7Z7L8 435 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 SFTPA1Q8IWL2 248 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 PLA2G15Q8NCC3 412 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 ZNF296Q8WUU4 475 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 XAGE5Q8WWM1 108 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 ASB15Q8WXK1 588 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 NXPE3Q969Y0 559 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 ARRDC3Q96B67 414 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 EFHD2Q96C19 240 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 NUS1Q96E22 293 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 TMEM80Q96HE8 168 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 PRAP1Q96NZ9 151 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 OR2A14Q96R47 310 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 TP63Q9H3D4 680 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 TIGARQ9NQ88 270 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 SIRT3Q9NTG7 399 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 TEX10Q9NXF1 929 aaPredicted RBP14.99□□□□□ -0.01
LDLR-204ENST00000545707 SAGE1Q9NXZ1 904 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 DKK3Q9UBP4 350 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 ICKQ9UPZ9 632 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 CARD8Q9Y2G2 431 aa14.99□□□□□ -0.01
LDLR-204ENST00000545707 PLD2O14939 933 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 PDPK1O15530 556 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 SLC28A2O43868 658 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 PRKYO43930 277 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 PRKRAO75569 313 aaKnown RBP14.98□□□□□ -0.01
LDLR-204ENST00000545707 PAPLNO95428 1278 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 CLEC2LP0C7M8 214 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 ETV6P41212 452 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 MAPK9P45984 424 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 OR2B6P58173 313 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 SLX4IPQ5VYV7 408 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 PLPP4Q5VZY2 271 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 TMC5Q6UXY8 1006 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 YIPF4Q9BSR8 244 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 PRR14Q9BWN1 585 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 RNF208Q9H0X6 261 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 NEK6Q9HC98 313 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 FZD3Q9NPG1 666 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 WDR70Q9NW82 654 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 SEC14L3Q9UDX4 400 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 ENOPH1Q9UHY7 261 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 CKAP5Q14008 2032 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 TMPRSS11DO60235 418 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 CYP17A1P05093 508 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 SERPIND1P05546 499 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 ALPPL2P10696 532 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 CD72P21854 359 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 BSGP35613 385 aa14.98□□□□□ -0.01
LDLR-204ENST00000545707 KHDRBS2Q5VWX1 349 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms