RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 LRRC39Q96DD0 335 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 VPS39Q96JC1 886 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 C18orf12Q96KH6 178 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 TIMP4Q99727 224 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 MS4A8Q9BY19 250 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 DERL2Q9GZP9 239 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 POPDC3Q9HBV1 291 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 WWOXQ9NZC7 414 aa18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 CNOT11Q9UKZ1 510 aaKnown RBP18.33■□□□□ 0.52
LPCAT3-211ENST00000543794 GOLGA6L10A0A0M3HER8 536 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 DYRK3O43781 588 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 STK16O75716 305 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 IL2RAP01589 272 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 CPN2P22792 545 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 HSPA7P48741 367 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 ZNF136P52737 540 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 WNT3P56703 355 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 CRYZQ08257 329 aaKnown RBP18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 MGAT5Q09328 741 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 TBCCQ15814 346 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 HIST2H2ACQ16777 129 aaPredicted RBP18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 AP5B1Q2VPB7 878 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 TMEM35AQ53FP2 167 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 FBXO48Q5FWF7 155 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 PAGE2BQ5JRK9 111 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 FBXW10Q5XX13 1052 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 HIST2H2AA3Q6FI13 130 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 DGAT2L6Q6ZPD8 337 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 KIF18BQ86Y91 864 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 BBOF1Q8ND07 529 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 FAM13CQ8NE31 585 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 ZNF473Q8WTR7 871 aaKnown RBP18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 FBXL20Q96IG2 436 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 ART5Q96L15 291 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 JSRP1Q96MG2 331 aaPredicted RBP18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 MOCS1Q9NZB8 636 aa18.32■□□□□ 0.52
LPCAT3-211ENST00000543794 C15orf38-AP3S2A0A0A6YYH1 394 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 ANKRD33BA6NCL7 494 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 TRIM3O75382 744 aaPredicted RBP18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 WISP3O95389 354 aaPredicted RBP18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 EPORP19235 508 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 CASP2P42575 452 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 MSH2P43246 934 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 E2F2Q14209 437 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 MORF4L2Q15014 288 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 PDK4Q16654 411 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 NSUN5P2Q63ZY6 315 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 SULT1C3Q6IMI6 304 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 Q71RC1 249 aaPredicted RBP18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 GPSM1Q86YR5 675 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 SNX31Q8N9S9 440 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 LINC01560Q8TB33 94 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 MCMBPQ9BTE3 642 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 DOHHQ9BU89 302 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 PRDM14Q9GZV8 571 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 EPB41L4BQ9H329 900 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 RPF2Q9H7B2 306 aaKnown RBP18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 PPP2R2CQ9Y2T4 447 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 IKBKGQ9Y6K9 419 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 ARHGAP21Q5T5U3 1957 aa18.31■□□□□ 0.52
LPCAT3-211ENST00000543794 IQANK1A0A1B0GTG1 560 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 GOSR1O95249 250 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 INHBBP09529 407 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 GDF1P27539 372 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 SORDQ00796 357 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 PLIN5Q00G26 463 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 IRF8Q02556 426 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 CHIT1Q13231 466 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 SF3B4Q15427 424 aaKnown RBP eCLIP18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 NTRK2Q16620 822 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 TBCELQ5QJ74 424 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 CHSY3Q70JA7 882 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 SLC29A4Q7RTT9 530 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 PM20D2Q8IYS1 436 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 SPATA6LQ8N4H0 392 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 TANKQ92844 425 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 OSBPL9Q96SU4 736 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 KRT12Q99456 494 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 PHACTR1Q9C0D0 580 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 DDX47Q9H0S4 455 aaKnown RBP18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 RHOJQ9H4E5 214 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 NEUROD4Q9HD90 331 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 MS4A12Q9NXJ0 267 aa18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 PTBP2Q9UKA9 531 aaKnown RBP18.3■□□□□ 0.52
LPCAT3-211ENST00000543794 NINQ8N4C6 2090 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 CD8B2A6NJW9 211 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 TGFB1P01137 390 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 SLAMF1Q13291 335 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 TMEM198Q66K66 360 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 VASNQ6EMK4 673 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 KRTAP1-3Q8IUG1 177 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 LRRC8AQ8IWT6 810 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 LAS2Q8IYD9 372 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 ST13P4Q8IZP2 240 aaPredicted RBP18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 UBE2E3Q969T4 207 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 HSPBAP1Q96EW2 488 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 WWTR1Q9GZV5 400 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 UBQLN3Q9H347 655 aa18.29■□□□□ 0.52
LPCAT3-211ENST00000543794 JKAMPQ9P055 326 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms