RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CYP4B1P13584 511 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 EPHA2P29317 976 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 SIM1P81133 766 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 IL1RL1Q01638 556 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 ID2Q02363 134 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 LIN52Q52LA3 116 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 SHQ1Q6PI26 577 aaKnown RBP16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 TTC33Q6PID6 262 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 OR9A2Q8NGT5 310 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 BAHD1Q8TBE0 780 aaPredicted RBP16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 KAT2AQ92830 837 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 GAL3ST3Q96A11 431 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 IL21RQ9HBE5 538 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 ZCCHC3Q9NUD5 404 aaKnown RBP16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 EHD3Q9NZN3 535 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 KCMF1Q9P0J7 381 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 AASSQ9UDR5 926 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 MYRFQ9Y2G1 1151 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 KCNE3Q9Y6H6 103 aa16.29■□□□□ 0.2
TMEM50B-210ENST00000542230 TLR4O00206 839 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 CASC3O15234 703 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 CSF2P04141 144 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 CSNK1EP49674 416 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 ZP2Q05996 745 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 RGS1Q08116 209 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 RBBP4Q09028 425 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 SRSF5Q13243 272 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 ZNF630Q2M218 657 aaPredicted RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 ARL10Q8N8L6 244 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 TSPAN14Q8NG11 270 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 PSMA8Q8TAA3 256 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 NT5CQ8TCD5 201 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 XAGE5Q8WWM1 108 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 ZNF681Q96N22 645 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 RBM4BQ9BQ04 359 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 ZFYVE21Q9BQ24 234 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 RBM4Q9BWF3 364 aaKnown RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 YIPF3Q9GZM5 350 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 OR51I1Q9H343 314 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 C8orf4Q9NR00 106 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 SMIM10L1P0DMW3 83 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 GSTM2P28161 218 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 RRM2P31350 389 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 MYBPC3Q14896 1274 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 NADK2Q4G0N4 442 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 CCDC80Q76M96 950 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 COMTD1Q86VU5 262 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 PJA1Q8NG27 643 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 SGCDQ92629 289 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 SMIM10Q96HG1 83 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 C10orf90Q96M02 699 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 UCKL1Q9NWZ5 548 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 PCDHGA2Q9Y5H1 932 aa16.28■□□□□ 0.2
TMEM50B-210ENST00000542230 ZDBF2Q9HCK1 2354 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 MC3RP41968 323 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 ITGA1P56199 1179 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 VSX2P58304 361 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 LASP1Q14847 261 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 DEFB133Q30KQ1 61 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 CRB2Q5IJ48 1285 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 REEP3Q6NUK4 255 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 PIWIL3Q7Z3Z3 882 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 PATL1Q86TB9 770 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 TMEM52Q8NDY8 209 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 SRFBP1Q8NEF9 429 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 TMIGD2Q96BF3 282 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 ZNF764Q96H86 408 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 RUBCNLQ9H714 662 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 EQTNQ9NQ60 294 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 THUMPD1Q9NXG2 353 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 USE1Q9NZ43 259 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 RHCGQ9UBD6 479 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 TRPC4Q9UBN4 977 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 BAG5Q9UL15 447 aa16.27■□□□□ 0.2
TMEM50B-210ENST00000542230 HMGN2P05204 90 aaKnown RBP16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 NME1P15531 152 aaKnown RBP16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 NTSP30990 170 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 BLKP51451 505 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 LIM2P55344 173 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 TSSK4Q6SA08 328 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 ARL14Q8N4G2 192 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 DEFB123Q8N688 67 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 C1orf216Q8TAB5 229 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 COL26A1Q96A83 441 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 CD320Q9NPF0 282 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 PCDHGA8Q9Y5G5 932 aa16.27■□□□□ 0.19
TMEM50B-210ENST00000542230 EML5Q05BV3 1969 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 A0A0J9YY10 115 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 OR5K4A6NMS3 321 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 FAM227AF5H4B4 570 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 HPRP00739 348 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 DNAJA1P31689 397 aaKnown RBP16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 SIM2Q14190 667 aaPredicted RBP16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 MLC1Q15049 377 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 HIPK1Q86Z02 1210 aa16.26■□□□□ 0.19
TMEM50B-210ENST00000542230 RBM45Q8IUH3 476 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms