RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TBCDQ9BTW9 1192 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 NANOGQ9H9S0 305 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SLAMF7Q9NQ25 335 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PRDM7Q9NQW5 492 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 POMPQ9Y244 141 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ZNF292O60281 2723 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MUC6Q6W4X9 2439 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 A0A1W2PQM1 296 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 MEGF11A6BM72 1044 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SGK494L7N484 410 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 CLEC3AO75596 197 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ERAL1O75616 437 aaKnown RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 CCNDBP1O95273 360 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 C6orf47O95873 294 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 PRPS2P11908 318 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ETS2P15036 469 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 MAPK1P28482 360 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 CD1CP29017 333 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ADSLP30566 484 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 KIR3DL1P43629 444 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 HNRNPFP52597 415 aaKnown RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 RPS15AP62244 130 aaKnown RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 CCL7P80098 99 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 MAT1AQ00266 395 aaKnown RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 HSPB3Q12988 150 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ERV3-1Q14264 604 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC9A5Q14940 896 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 C16orf72Q14CZ0 275 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 PDK3Q15120 406 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 PIGGQ5H8A4 983 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 NDUFAF5Q5TEU4 345 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 FAM71E1Q6IPT2 247 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ABHD17CQ6PCB6 329 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 UGT2A3Q6UWM9 527 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ANGPTL8Q6UXH0 198 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ZNF574Q6ZN55 896 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ZNF551Q7Z340 670 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SPRED1Q7Z699 444 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 GPR180Q86V85 440 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC15A3Q8IY34 581 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 FBXW8Q8N3Y1 598 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 TMEM52Q8NDY8 209 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SIMC1Q8NDZ2 872 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 CATSPER1Q8NEC5 780 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 OR2L5Q8NG80 312 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 OR10Q1Q8NGQ4 319 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 OR9A4Q8NGU2 314 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 UTP15Q8TED0 518 aaKnown RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 TMEM125Q96AQ2 219 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 TM4SF18Q96CE8 201 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 MAGEB10Q96LZ2 347 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 PANX1Q96RD7 426 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 DPH2Q9BQC3 489 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 CCDC3Q9BQI4 270 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 DUSP26Q9BV47 211 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 TWSG1Q9GZX9 223 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 RBM38Q9H0Z9 239 aaKnown RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SEMA6CQ9H3T2 930 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SOX17Q9H6I2 414 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ZNF696Q9H7X3 374 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ERVMER34-1Q9H9K5 563 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ZFP64Q9NPA5 681 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 MIEF1Q9NQG6 463 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 FAIMQ9NVQ4 179 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 RHBDL2Q9NX52 303 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ASIC5Q9NY37 505 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 ANKMY1Q9P2S6 941 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 SUSD2Q9UGT4 822 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 LEF1Q9UJU2 399 aaPredicted RBP7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 TMED5Q9Y3A6 229 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 MAU2Q9Y6X3 613 aa7.3□□□□□ -1.24
AC005840.3-201ENST00000541888 A0A096LPE4 126 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 A0A0A6YYC8 382 aaPredicted RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 A0A0A6YYD5 115 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 C15orf38-AP3S2A0A0A6YYH1 394 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 A0A1W2PPZ6 126 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 A0A1W2PR48 441 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 LILRA5A6NI73 299 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 I3L1I5 382 aaPredicted RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 TNFSF14O43557 240 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 DENRO43583 198 aaKnown RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 NUDT21O43809 227 aaKnown RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 SCN2BO60939 215 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 CBFA2T3O75081 653 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 RDH16O75452 317 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 E2F6O75461 281 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 KCNH1O95259 989 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 AIFM1O95831 613 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 RPLP0P05388 317 aaKnown RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 HNRNPCP07910 306 aaKnown RBP eCLIP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 FAM58BPP0C7Q3 252 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC35G6P0C7Q6 338 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 FOLR1P15328 257 aa7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 HIST1H1TP22492 207 aaPredicted RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 ATP5A1P25705 553 aaKnown RBP7.29□□□□□ -1.24
AC005840.3-201ENST00000541888 PTPN6P29350 595 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms