RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ACSL6Q9UKU0 697 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 OAZ3Q9UMX2 235 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 CDYLQ9Y232 598 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 PCDHA9Q9Y5H5 950 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 SLCO1B1Q9Y6L6 691 aa4.97□□□□□ -1.61
SNHG1-218ENST00000541615 XRN1Q8IZH2 1706 aaKnown RBP4.97□□□□□ -1.61
SNHG1-218ENST00000541615 SPEF2Q9C093 1822 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MEIKINA0A087WXM9 373 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MAGEB6P1A0A0J9YX57 407 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 A0A1W2PQ09 198 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 TCRBV21S2A2A0A5A6 115 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 C7orf66A4D0T2 115 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 OR2A25A4D2G3 310 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 NEMP2A6NFY4 417 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 TMEM238C9JI98 176 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 E5RJQ4 531 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 F5H423 210 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 F8VP50 259 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 H7C417 338 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 SGK494L7N484 410 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MEIS2O14770 477 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 SPINT1O43278 529 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 KCNAB3O43448 404 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 GMFGO60234 142 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CYTIPO60759 359 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ZNF821O75541 412 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 GLCEO94923 617 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 SPDEFO95238 335 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 KAT7O95251 611 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 AP2A1O95782 977 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 IGHV2-5P01817 119 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 LRG1P02750 347 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 INHAP05111 366 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PHKG2P15735 406 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PPP3CBP16298 524 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 BMP7P18075 431 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 EFNA1P20827 205 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MAGP20916 626 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 AGAP20933 346 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 BCKDHBP21953 392 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ELK4P28324 431 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CD1BP29016 333 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 FMO3P31513 532 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 TNFSF8P32971 234 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CDX1P47902 265 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ATP4BP51164 291 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CRYBB1P53674 252 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 SLC12A3P55017 1021 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 FCGRTP55899 365 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 WNT4P56705 351 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 RAC3P60763 192 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 RPS20P60866 119 aaKnown RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 RBX1P62877 108 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CXADRP78310 365 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MRPS11P82912 194 aaKnown RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 HTRA3P83110 453 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PTSQ03393 145 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CHRNB3Q05901 458 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ELAVL2Q12926 359 aaKnown RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PDZK1IP1Q13113 114 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CHIT1Q13231 466 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MTM1Q13496 603 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 KEAP1Q14145 624 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 HMGN3Q15651 99 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 TBCEQ15813 527 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PNLIPRP3Q17RR3 467 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 EXOC3L2Q2M3D2 409 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ZNF284Q2VY69 593 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 LGALSLQ3ZCW2 172 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 SOWAHCQ53LP3 525 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 TMEM67Q5HYA8 995 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 NKAPLQ5M9Q1 402 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CELF3Q5SZQ8 465 aaKnown RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 C10orf91Q5T1B1 145 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 GLYATQ6IB77 296 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ZCCHC12Q6PEW1 402 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PRSS55Q6UWB4 352 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 MBOAT1Q6ZNC8 495 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 RBM23Q86U06 439 aaKnown RBP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 TSPAN33Q86UF1 283 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ATCAYQ86WG3 371 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 C1QL4Q86Z23 238 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PRSS58Q8IYP2 241 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 CFAP206Q8IYR0 622 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 OFCC1Q8IZS5 231 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 LCORLQ8N3X6 602 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 HDDC3Q8N4P3 179 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ACBD7Q8N6N7 88 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ANKRD52Q8NB46 1076 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 POGLUT1Q8NBL1 392 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PLA2G15Q8NCC3 412 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PXT1Q8NFP0 134 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 OR4Q3Q8NH05 313 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 OR10A6Q8NH74 314 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 ZNF671Q8TAW3 534 aa4.96□□□□□ -1.62
SNHG1-218ENST00000541615 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNHG1-218ENST00000541615 LNX1Q8TBB1 728 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms