RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 GABRR3A8MPY1 467 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 TGFBR3LH3BV60 316 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 ATP8B1O43520 1251 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 TMPRSS11DO60235 418 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 CRCPO75575 148 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 RASAL1O95294 804 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 IFNA16P05015 189 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 LINC00032P0C843 101 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 EDN3P14138 238 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 HIST1H1TP22492 207 aaPredicted RBP13.28□□□□□ -0.28
LTBR-209ENST00000541102 CD96P40200 585 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 RAP1GDS1P52306 607 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 HSD17B7P56937 341 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 PHEXP78562 749 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 BTKQ06187 659 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 OR1C1Q15619 314 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 SPINK14Q6IE38 97 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 COMMD6Q7Z4G1 85 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 SCUBE1Q8IWY4 988 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 ZNF595Q8IYB9 648 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
LTBR-209ENST00000541102 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 SSC4DQ8WTU2 575 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 THAP3Q8WTV1 239 aaPredicted RBP13.28□□□□□ -0.28
LTBR-209ENST00000541102 ZNF75CPQ92670 426 aaPredicted RBP13.28□□□□□ -0.28
LTBR-209ENST00000541102 APIPQ96GX9 242 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 C3orf30Q96M34 536 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 SIGLEC12Q96PQ1 595 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 SERPINI1Q99574 410 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 MANSC1Q9H8J5 431 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 BRF2Q9HAW0 419 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 KLHL1Q9NR64 748 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 GIMAP2Q9UG22 337 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 FBXW2Q9UKT8 454 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 OSGIN2Q9Y236 505 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 ZGRF1Q86YA3 2104 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 CPAMD8Q8IZJ3 1885 aa13.27□□□□□ -0.28
LTBR-209ENST00000541102 TRBV11-1A0A0K0K1C0 115 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 SERTM1A2A2V5 107 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 WASHC1A8K0Z3 465 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 CYR61O00622 381 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 PIP5K1BO14986 540 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 CTNSO60931 367 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 PRKRAO75569 313 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 SCELO95171 688 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 KLK1P06870 262 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 GRK2P25098 689 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 TPP2P29144 1249 aaPredicted RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 SERPINB5P36952 375 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 SSR2P43308 183 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 RAE1P78406 368 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 PMP22Q01453 160 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 STX4Q12846 297 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 Q6ZSR9 355 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 TRIM46Q7Z4K8 759 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 CLYBLQ8N0X4 340 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 MMP21Q8N119 569 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 METTL4Q8N3J2 472 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 C1orf52Q8N6N3 182 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 B3GNT7Q8NFL0 401 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 CHTF18Q8WVB6 975 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 TWIST2Q8WVJ9 160 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 C5orf34Q96MH7 638 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 PSMG3-AS1Q96PY0 264 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 HES7Q9BYE0 225 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 DDX31Q9H8H2 851 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 EML4Q9HC35 981 aaKnown RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 VPS29Q9UBQ0 182 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 ERRFI1Q9UJM3 462 aaPredicted RBP13.27□□□□□ -0.29
LTBR-209ENST00000541102 SPACA6W5XKT8 324 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 ICE1Q9Y2F5 2266 aa13.27□□□□□ -0.29
LTBR-209ENST00000541102 ARHGAP10A1A4S6 786 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 CYSRT1A8MQ03 144 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 SKAP2O75563 359 aaPredicted RBP13.26□□□□□ -0.29
LTBR-209ENST00000541102 SEMA3DO95025 777 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 RNF224P0DH78 156 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 CD46P15529 392 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 TNNI3P19429 210 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 CPN2P22792 545 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 CLCN2P51788 898 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 MLF1P58340 268 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 OCRLQ01968 901 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 ID2Q02363 134 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 CSTF3Q12996 717 aaKnown RBP13.26□□□□□ -0.29
LTBR-209ENST00000541102 SLAMF1Q13291 335 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 C10orf62Q5T681 223 aaPredicted RBP13.26□□□□□ -0.29
LTBR-209ENST00000541102 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
LTBR-209ENST00000541102 C18orf63Q68DL7 685 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 MRM1Q6IN84 353 aaKnown RBP13.26□□□□□ -0.29
LTBR-209ENST00000541102 NR4A3Q92570 626 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 NCLNQ969V3 563 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 C11orf24Q96F05 449 aaPredicted RBP13.26□□□□□ -0.29
LTBR-209ENST00000541102 PPP1R36Q96LQ0 422 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 SLX1AQ9BQ83 275 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 CENPKQ9BS16 269 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 ALOXE3Q9BYJ1 711 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 LYRM4Q9HD34 91 aa13.26□□□□□ -0.29
LTBR-209ENST00000541102 SLCO1B3Q9NPD5 702 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms