RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ANKRD49Q8WVL7 239 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 HSPBAP1Q96EW2 488 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 RBM18Q96H35 190 aaKnown RBP24.63■■□□□ 1.53
CHFR-218ENST00000540963 DERL2Q9GZP9 239 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 PLEKHF2Q9H8W4 249 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 PRAMEF4O60810 478 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 HIST1H1TP22492 207 aaPredicted RBP24.62■■□□□ 1.53
CHFR-218ENST00000540963 ELK3P41970 407 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 CRYZQ08257 329 aaKnown RBP24.62■■□□□ 1.53
CHFR-218ENST00000540963 DOC2AQ14183 400 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 ZNF460Q14592 562 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 TBCCQ15814 346 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 HIST2H2ACQ16777 129 aaPredicted RBP24.62■■□□□ 1.53
CHFR-218ENST00000540963 PRAMEF20Q5VT98 475 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 PRAMEF9Q5VWM5 478 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 HIST2H2AA3Q6FI13 130 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 ADNP2Q6IQ32 1131 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 BBOF1Q8ND07 529 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 CFAP36Q96G28 342 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 WDR83Q9BRX9 315 aaKnown RBP24.62■■□□□ 1.53
CHFR-218ENST00000540963 TMEM79Q9BSE2 394 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 MS4A8Q9BY19 250 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 NEUROD4Q9HD90 331 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 MS4A12Q9NXJ0 267 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 WWOXQ9NZC7 414 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 CNOT11Q9UKZ1 510 aaKnown RBP24.62■■□□□ 1.53
CHFR-218ENST00000540963 TEX264Q9Y6I9 313 aa24.62■■□□□ 1.53
CHFR-218ENST00000540963 TAPBPO15533 448 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 CPN2P22792 545 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 PLIN5Q00G26 463 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 ID2Q02363 134 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 MGAT5Q09328 741 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 DUSP8Q13202 625 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 E2F2Q14209 437 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 NSUN5P2Q63ZY6 315 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 FAM13CQ8NE31 585 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 CAPZA3Q96KX2 299 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 TIMP4Q99727 224 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 DOHHQ9BU89 302 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 PRDM14Q9GZV8 571 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 CHMP2BQ9UQN3 213 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 PSAT1Q9Y617 370 aa24.61■■□□□ 1.53
CHFR-218ENST00000540963 C15orf38-AP3S2A0A0A6YYH1 394 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 FAM171A2A8MVW0 826 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 FGF17O60258 216 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 STK16O75716 305 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 INHBBP09529 407 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 CD22P20273 847 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 ADSLP30566 484 aaPredicted RBP24.6■■□□□ 1.53
CHFR-218ENST00000540963 ZNF136P52737 540 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 MORF4L2Q15014 288 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 NTRK2Q16620 822 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 PDK4Q16654 411 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 AP5B1Q2VPB7 878 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 SULT1C3Q6IMI6 304 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 SLC29A4Q7RTT9 530 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 OR10G3Q8NGC4 313 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 TANKQ92844 425 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 UBE2E3Q969T4 207 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 ZNF597Q96LX8 424 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 PELOQ9BRX2 385 aaKnown RBP24.6■■□□□ 1.53
CHFR-218ENST00000540963 PHACTR1Q9C0D0 580 aa24.6■■□□□ 1.53
CHFR-218ENST00000540963 BEX4Q9NWD9 120 aaPredicted RBP24.6■■□□□ 1.53
CHFR-218ENST00000540963 NCF1BA6NI72 391 aaPredicted RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 CD8B2A6NJW9 211 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 NCF1CA8MVU1 366 aaPredicted RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 TRIM3O75382 744 aaPredicted RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 NCF1P14598 390 aaPredicted RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 GDF1P27539 372 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 SERPINB1P30740 379 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 CASP2P42575 452 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 MSH2P43246 934 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 TRPC1P48995 793 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 SHEQ5VZ18 495 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 TMEM198Q66K66 360 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 CHSY3Q70JA7 882 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 ZNF473Q8WTR7 871 aaKnown RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 JSRP1Q96MG2 331 aaPredicted RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 RPF2Q9H7B2 306 aaKnown RBP24.59■■□□□ 1.53
CHFR-218ENST00000540963 NSMCE4AQ9NXX6 385 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 DOCK7Q96N67 2140 aa24.59■■□□□ 1.53
CHFR-218ENST00000540963 OR6C76A6NM76 312 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 TP73O15350 636 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 ZSCAN12O43309 604 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 IL18BPO95998 194 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 RPL21P46778 160 aaKnown RBP24.58■■□□□ 1.53
CHFR-218ENST00000540963 DCAF7P61962 342 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 SPRED3Q2MJR0 410 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 NHSL2Q5HYW2 709 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 GPSM1Q86YR5 675 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 CREG2Q8IUH2 290 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 ST13P4Q8IZP2 240 aaPredicted RBP24.58■■□□□ 1.53
CHFR-218ENST00000540963 SNX31Q8N9S9 440 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 KRT12Q99456 494 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 RHOJQ9H4E5 214 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 JKAMPQ9P055 326 aa24.58■■□□□ 1.53
CHFR-218ENST00000540963 IQANK1A0A1B0GTG1 560 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 CLCA1A8K7I4 914 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 CAPN14A8MX76 684 aa24.57■■□□□ 1.52
CHFR-218ENST00000540963 SNX4O95219 450 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms