RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
CDH20-202ENST00000536675 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
CDH20-202ENST00000536675 RSPO3Q9BXY4 272 aaPredicted RBP13.78□□□□□ -0.2
CDH20-202ENST00000536675 POLR2J3Q9H1A7 115 aaKnown RBP13.78□□□□□ -0.2
CDH20-202ENST00000536675 MGAT4BQ9UQ53 548 aa13.78□□□□□ -0.2
CDH20-202ENST00000536675 PRELID1Q9Y255 219 aa13.78□□□□□ -0.2
CDH20-202ENST00000536675 SF3B6Q9Y3B4 125 aaKnown RBP13.78□□□□□ -0.2
CDH20-202ENST00000536675 PCDHGB7Q9Y5F8 929 aa13.78□□□□□ -0.2
CDH20-202ENST00000536675 ARHGEF33A8MVX0 844 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 SOCS5O75159 536 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 SOAT1P35610 550 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 MAPK12P53778 367 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 PTPN5P54829 565 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 ZNF763Q0D2J5 394 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 ARHGEF6Q15052 776 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 CCSMST1Q4G0I0 132 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 CDONQ4KMG0 1287 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 MPPE1Q53F39 396 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 TOR2AQ5JU69 321 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 DCAF4L2Q8NA75 395 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.77□□□□□ -0.2
CDH20-202ENST00000536675 TM9SF4Q92544 642 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 KLF16Q9BXK1 252 aaPredicted RBP13.77□□□□□ -0.2
CDH20-202ENST00000536675 BRD9Q9H8M2 597 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 TESQ9UGI8 421 aaKnown RBP13.77□□□□□ -0.2
CDH20-202ENST00000536675 PLXND1Q9Y4D7 1925 aa13.77□□□□□ -0.2
CDH20-202ENST00000536675 TSC22D2O75157 780 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 SLC43A1O75387 559 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 APOL3O95236 402 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 FURINP09958 794 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 ATP1B2P14415 290 aaPredicted RBP13.77□□□□□ -0.21
CDH20-202ENST00000536675 TNNI3P19429 210 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 CDH18Q13634 790 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 KCNC3Q14003 757 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 DCST1Q5T197 706 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 SDE2Q6IQ49 451 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 QSOX2Q6ZRP7 698 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 C9orf62Q8N4C0 152 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 TMEM43Q9BTV4 400 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 SAP18O00422 153 aaKnown RBP13.77□□□□□ -0.21
CDH20-202ENST00000536675 STK25O00506 426 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 ADAM12O43184 909 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 TP53P04637 393 aaPredicted RBP13.77□□□□□ -0.21
CDH20-202ENST00000536675 RPLP2P05387 115 aaKnown RBP13.77□□□□□ -0.21
CDH20-202ENST00000536675 LHCGRP22888 699 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
CDH20-202ENST00000536675 RAB25P57735 213 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 CYP4F8P98187 520 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 FABP5Q01469 135 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 IL18Q14116 193 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 PGBD2Q6P3X8 592 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 AGTRAPQ6RW13 159 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
CDH20-202ENST00000536675 FAM92BQ6ZTR7 304 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 TPRG1Q6ZUI0 275 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 SLC37A3Q8NCC5 494 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 GPR32P1Q8NGA4 272 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 TMEM163Q8TC26 289 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 GATAD2BQ8WXI9 593 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 PPCDCQ96CD2 204 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDH20-202ENST00000536675 HCSTQ9UBK5 93 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
CDH20-202ENST00000536675 CKAP5Q14008 2032 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 ORC5O43913 435 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 ZNF821O75541 412 aaPredicted RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 WEE1P30291 646 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 WNT4P56705 351 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 DSTNP60981 165 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 C2orf80Q0P641 193 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 MRPL28Q13084 256 aaKnown RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 REEP3Q6NUK4 255 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 TCTN3Q6NUS6 607 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 TAS1R1Q7RTX1 841 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 RBM45Q8IUH3 476 aaKnown RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 RASGRP3Q8IV61 690 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 FAM26EQ8N5C1 309 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 WDR48Q8TAF3 677 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 LYSMD1Q96S90 227 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 SYT17Q9BSW7 474 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 STOX2Q9P2F5 926 aaPredicted RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 GULP1Q9UBP9 304 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 SLC30A4O14863 429 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 NCR1O76036 304 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 DDX5P17844 614 aaKnown RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 PDE7AQ13946 482 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 IER5LQ5T953 404 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 RETSATQ6NUM9 610 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 COMMD6Q7Z4G1 85 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 OR8H1Q8NGG4 311 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 AKAP1Q92667 903 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDH20-202ENST00000536675 MTERF3Q96E29 417 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 ZNF582Q96NG8 517 aaPredicted RBP13.76□□□□□ -0.21
CDH20-202ENST00000536675 KCNJ15Q99712 375 aa13.76□□□□□ -0.21
CDH20-202ENST00000536675 PAK6Q9NQU5 681 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms