RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PCDH15Q96QU1 1955 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 NID2Q14112 1375 aa3□□□□□ -1.93
SNHG1-202ENST00000535689 NUMA1Q14980 2115 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 PTPN13Q12923 2485 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 STK36Q9NRP7 1315 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TDRD6O60522 2096 aaKnown RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 OBSL1O75147 1896 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 A0A1W2PRQ8 180 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 HTR3EA5X5Y0 456 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MEI4A8MW99 385 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 SMIM1B2RUZ4 78 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 BLOC1S5-TXNDC5H3BN57 136 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 K7EQS6 105 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 LAD1O00515 517 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 PTGESO14684 152 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 XPNPEP2O43895 674 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 SNX3O60493 162 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 KRT33AO76009 404 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 STBD1O95210 358 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 SIX3O95343 332 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 LYPLA2O95372 231 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 PLEKHA8P1O95397 391 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 KLF8O95600 359 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 EML2O95834 649 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 IGLV2-11P01706 119 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 ATP5BP06576 529 aaKnown RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 ODC1P11926 461 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 KCNE1P15382 129 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MSH3P20585 1137 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CYP3A5P20815 502 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 BCKDHBP21953 392 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MUTP22033 750 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CDH3P22223 829 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 ACAT1P24752 427 aaKnown RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 DNASE1P24855 282 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 PTPN3P26045 913 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 NAMPTP43490 491 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 BRCC3P46736 316 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 NAGLUP54802 743 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TPD52P55327 224 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 DLX5P56178 289 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 DLK1P80370 383 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 RBP5P82980 135 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MYL7Q01449 175 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TSPY1Q01534 308 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 LGALS3BPQ08380 585 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CCDC173Q0VFZ6 552 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MTF1Q14872 753 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CDO1Q16878 200 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 HLA-BQ31612 363 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 XKR4Q5GH76 650 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TECRLQ5HYJ1 363 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 FGD3Q5JSP0 725 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 SLC35D3Q5M8T2 416 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 C6orf136Q5SQH8 315 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TEX38Q6PEX7 206 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TRIM65Q6PJ69 517 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CORO6Q6QEF8 472 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 ALKAL1Q6UXT8 129 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CLEC17AQ6ZS10 378 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 ISCA2Q86U28 154 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 DNAJC22Q8N4W6 341 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 SPATA20Q8TB22 786 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 LRRC8CQ8TDW0 803 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TBCKQ8TEA7 893 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 RLN3Q8WXF3 142 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 KIFAP3Q92845 792 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 SPSB1Q96BD6 273 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 AK8Q96MA6 479 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 ZMAT2Q96NC0 199 aaKnown RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 XPO6Q96QU8 1125 aaKnown RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MGME1Q9BQP7 344 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 HPS4Q9NQG7 708 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 B3GAT1Q9P2W7 334 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 DEC1Q9P2X7 70 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 CACNG4Q9UBN1 327 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 GTF3C4Q9UKN8 822 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MYO9AB2RTY4 2548 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 MUC22E2RYF6 1773 aaPredicted RBP2.99□□□□□ -1.93
SNHG1-202ENST00000535689 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
SNHG1-202ENST00000535689 TP53BP1Q12888 1972 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-202ENST00000535689 UBR5O95071 2799 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-202ENST00000535689 IGHV1OR15-9A0A0B4J2B8 117 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 TEX13DA0A0J9YY54 714 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-202ENST00000535689 IQCMA0A1B0GVH7 501 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 CYSRT1A8MQ03 144 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 H0YCG3 227 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 K7ENP7 123 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 PLOD2O00469 737 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 ARPC2O15144 300 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 ATP6V0E1O15342 81 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 RAD51DO75771 328 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 DFFBO76075 338 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 ZNF432O94892 652 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 SLITRK3O94933 977 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 PGLSO95336 258 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 WDPCPO95876 746 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 MCF2P10911 925 aa2.98□□□□□ -1.93
SNHG1-202ENST00000535689 GLRA2P23416 452 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms