RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TNNI3P19429 210 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 TRHRP34981 398 aaPredicted RBP19.03■□□□□ 0.64
CCS-208ENST00000533244 SERPINB5P36952 375 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 ACSM2AQ08AH3 577 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 SPRED3Q2MJR0 410 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 ACSM2BQ68CK6 577 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 CLEC6AQ6EIG7 209 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 SLC48A1Q6P1K1 146 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 CISD2Q8N5K1 135 aaKnown RBP19.03■□□□□ 0.64
CCS-208ENST00000533244 ZNF321PQ8N8H1 164 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 MDS2Q8NDY4 140 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 OR8K3Q8NH51 312 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 PPWD1Q96BP3 646 aaKnown RBP19.03■□□□□ 0.64
CCS-208ENST00000533244 RBM18Q96H35 190 aaKnown RBP19.03■□□□□ 0.64
CCS-208ENST00000533244 TRIM45Q9H8W5 580 aaPredicted RBP19.03■□□□□ 0.64
CCS-208ENST00000533244 PCDHGB6Q9Y5F9 930 aa19.03■□□□□ 0.64
CCS-208ENST00000533244 A0A1W2PS29 197 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 TM9SF1O15321 606 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 PCDH7O60245 1069 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 CRCPO75575 148 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 RSL1D1O76021 490 aaKnown RBP19.02■□□□□ 0.64
CCS-208ENST00000533244 ZFAND5O76080 213 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 FGF4P08620 206 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 DHRS4L1P0CG22 281 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 PRPH2P23942 346 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 TIA1P31483 386 aaKnown RBP eCLIP19.02■□□□□ 0.64
CCS-208ENST00000533244 ARRB2P32121 409 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 CD96P40200 585 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 INAQ16352 499 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 ARL13AQ5H913 290 aaPredicted RBP19.02■□□□□ 0.64
CCS-208ENST00000533244 KANK2Q63ZY3 851 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 ZCCHC23Q6ZST2 131 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 HOMEZQ8IX15 550 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 C19orf60Q96EN9 201 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 FBXL20Q96IG2 436 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 UTP23Q9BRU9 249 aaKnown RBP19.02■□□□□ 0.64
CCS-208ENST00000533244 OR8D2Q9GZM6 311 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.02■□□□□ 0.64
CCS-208ENST00000533244 CENPHQ9H3R5 247 aa19.02■□□□□ 0.64
CCS-208ENST00000533244 PRAMEF2O60811 474 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 SERPINB4P48594 390 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 MPP2Q14168 576 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 ZNF468Q5VIY5 522 aaPredicted RBP19.01■□□□□ 0.63
CCS-208ENST00000533244 HSDL2Q6YN16 418 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 MMP21Q8N119 569 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 OR4K14Q8NGD5 310 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 SENP5Q96HI0 755 aaPredicted RBP19.01■□□□□ 0.63
CCS-208ENST00000533244 METTL2AQ96IZ6 378 aaKnown RBP19.01■□□□□ 0.63
CCS-208ENST00000533244 ART5Q96L15 291 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 SIGLEC12Q96PQ1 595 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 TUBB1Q9H4B7 451 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 RRAGDQ9NQL2 400 aaPredicted RBP19.01■□□□□ 0.63
CCS-208ENST00000533244 ASF1BQ9NVP2 202 aa19.01■□□□□ 0.63
CCS-208ENST00000533244 COPG1Q9Y678 874 aaKnown RBP19.01■□□□□ 0.63
CCS-208ENST00000533244 RELNP78509 3460 aa19■□□□□ 0.63
CCS-208ENST00000533244 HRKO00198 91 aa19■□□□□ 0.63
CCS-208ENST00000533244 FCHO1O14526 889 aa19■□□□□ 0.63
CCS-208ENST00000533244 NEURL1O76050 574 aa19■□□□□ 0.63
CCS-208ENST00000533244 PIK3R1P27986 724 aa19■□□□□ 0.63
CCS-208ENST00000533244 IMPG1Q17R60 797 aa19■□□□□ 0.63
CCS-208ENST00000533244 UGT3A2Q3SY77 523 aa19■□□□□ 0.63
CCS-208ENST00000533244 ZNF227Q86WZ6 799 aa19■□□□□ 0.63
CCS-208ENST00000533244 GALNT11Q8NCW6 608 aa19■□□□□ 0.63
CCS-208ENST00000533244 FAM76AQ8TAV0 307 aa19■□□□□ 0.63
CCS-208ENST00000533244 SREK1Q8WXA9 508 aaKnown RBP19■□□□□ 0.63
CCS-208ENST00000533244 ZBTB9Q96C00 473 aa19■□□□□ 0.63
CCS-208ENST00000533244 SCMH1Q96GD3 660 aa19■□□□□ 0.63
CCS-208ENST00000533244 FAIM2Q9BWQ8 316 aa19■□□□□ 0.63
CCS-208ENST00000533244 EML4Q9HC35 981 aaKnown RBP19■□□□□ 0.63
CCS-208ENST00000533244 ANKRD10Q9NXR5 420 aa19■□□□□ 0.63
CCS-208ENST00000533244 DNAJC15Q9Y5T4 150 aa19■□□□□ 0.63
CCS-208ENST00000533244 RP1L1Q8IWN7 2480 aaPredicted RBP19■□□□□ 0.63
CCS-208ENST00000533244 BIRC5O15392 142 aa19■□□□□ 0.63
CCS-208ENST00000533244 DYRK3O43781 588 aa19■□□□□ 0.63
CCS-208ENST00000533244 OR10H2O60403 315 aa19■□□□□ 0.63
CCS-208ENST00000533244 ITGA10O75578 1167 aa19■□□□□ 0.63
CCS-208ENST00000533244 ZWINTO95229 277 aa19■□□□□ 0.63
CCS-208ENST00000533244 IL3P08700 152 aa19■□□□□ 0.63
CCS-208ENST00000533244 MYZAPP0CAP1 466 aa19■□□□□ 0.63
CCS-208ENST00000533244 CPMP14384 443 aa19■□□□□ 0.63
CCS-208ENST00000533244 GSTM5P46439 218 aa19■□□□□ 0.63
CCS-208ENST00000533244 ST13P50502 369 aaKnown RBP19■□□□□ 0.63
CCS-208ENST00000533244 HLCSP50747 726 aa19■□□□□ 0.63
CCS-208ENST00000533244 XKP51811 444 aa19■□□□□ 0.63
CCS-208ENST00000533244 RNF4P78317 190 aa19■□□□□ 0.63
CCS-208ENST00000533244 BTKQ06187 659 aa19■□□□□ 0.63
CCS-208ENST00000533244 KIAA0040Q15053 153 aa19■□□□□ 0.63
CCS-208ENST00000533244 OR1C1Q15619 314 aa19■□□□□ 0.63
CCS-208ENST00000533244 CES4AQ5XG92 561 aa19■□□□□ 0.63
CCS-208ENST00000533244 Q6ZSR9 355 aa19■□□□□ 0.63
CCS-208ENST00000533244 SUN3Q8TAQ9 357 aa19■□□□□ 0.63
CCS-208ENST00000533244 PUM2Q8TB72 1066 aaKnown RBP eCLIP19■□□□□ 0.63
CCS-208ENST00000533244 C16orf78Q8WTQ4 265 aa19■□□□□ 0.63
CCS-208ENST00000533244 THAP3Q8WTV1 239 aaPredicted RBP19■□□□□ 0.63
CCS-208ENST00000533244 RIT1Q92963 219 aa19■□□□□ 0.63
CCS-208ENST00000533244 PKNOX2Q96KN3 472 aa19■□□□□ 0.63
CCS-208ENST00000533244 CXorf21Q9HAI6 301 aa19■□□□□ 0.63
CCS-208ENST00000533244 MYOTQ9UBF9 498 aa19■□□□□ 0.63
CCS-208ENST00000533244 HEY2Q9UBP5 337 aa19■□□□□ 0.63
CCS-208ENST00000533244 COPS7AQ9UBW8 275 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms