RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 HSDL2Q6YN16 418 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 RPS27LQ71UM5 84 aaKnown RBP17.57■□□□□ 0.4
SSH3-209ENST00000532600 EXOC3L1Q86VI1 746 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 MYLK4Q86YV6 388 aaPredicted RBP17.57■□□□□ 0.4
SSH3-209ENST00000532600 OR52B6Q8NGF0 335 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 C16orf52Q8NHV5 167 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 DAZLQ92904 295 aaKnown RBP17.57■□□□□ 0.4
SSH3-209ENST00000532600 UCN3Q969E3 161 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 TMEM125Q96AQ2 219 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 PGM2Q96G03 612 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 MAGED4Q96JG8 741 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 CDK15Q96Q40 435 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 PHF12Q96QT6 1004 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 CENPHQ9H3R5 247 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 IPPKQ9H8X2 491 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 ACTR8Q9H981 624 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 SUCOQ9UBS9 1254 aaKnown RBP17.57■□□□□ 0.4
SSH3-209ENST00000532600 MEMO1Q9Y316 297 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 ASB4Q9Y574 426 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 APCP25054 2843 aa17.57■□□□□ 0.4
SSH3-209ENST00000532600 UQCRHLA0A096LP55 91 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 A0A0A6YYD5 115 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 A0A1B0GTL3 188 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 ARHGAP10A1A4S6 786 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 TYROBPO43914 113 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 CCT5P48643 541 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 RNF4P78317 190 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 TNFRSF17Q02223 184 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 SERTAD2Q14140 314 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 CPSF6Q16630 551 aaKnown RBP eCLIP17.56■□□□□ 0.4
SSH3-209ENST00000532600 CMPK2Q5EBM0 449 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 DOLPP1Q86YN1 238 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 TICAM1Q8IUC6 712 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 GHDCQ8N2G8 530 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 ZCCHC7Q8N3Z6 543 aaKnown RBP17.56■□□□□ 0.4
SSH3-209ENST00000532600 ZNF808Q8N4W9 903 aaPredicted RBP17.56■□□□□ 0.4
SSH3-209ENST00000532600 PSD4Q8NDX1 1056 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 DOK4Q8TEW6 326 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 RGMAQ96B86 450 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 PPWD1Q96BP3 646 aaKnown RBP17.56■□□□□ 0.4
SSH3-209ENST00000532600 NSUN5Q96P11 429 aaKnown RBP17.56■□□□□ 0.4
SSH3-209ENST00000532600 RPF2Q9H7B2 306 aaKnown RBP17.56■□□□□ 0.4
SSH3-209ENST00000532600 ZBTB26Q9HCK0 441 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 ARGLU1Q9NWB6 273 aaPredicted RBP17.56■□□□□ 0.4
SSH3-209ENST00000532600 SLC17A7Q9P2U7 560 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 ADGRE2Q9UHX3 823 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 PLLPQ9Y342 182 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 ANGPTL3Q9Y5C1 460 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 PCDHGA11Q9Y5H2 935 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 HRH3Q9Y5N1 445 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 EML6Q6ZMW3 1958 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 ABCA12Q86UK0 2595 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 MYO9AB2RTY4 2548 aa17.56■□□□□ 0.4
SSH3-209ENST00000532600 SYNDIG1LA6NDD5 238 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 KLRC4-KLRK1H3BQV0 150 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 STX16-NPEPL1H3BU86 382 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 STX16O14662 325 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 PROM1O43490 865 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 HS6ST1O60243 411 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 UGDHO60701 494 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 SMIM24O75264 130 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 SASH3O75995 380 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 MLYCDO95822 493 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 IGKV3-11P04433 115 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 TNNI3P19429 210 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 STT3AP46977 705 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 FOLH1Q04609 750 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 ZNF750Q32MQ0 723 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 IL20RBQ6UXL0 311 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 ZYG11AQ6WRX3 759 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 RPTNQ6XPR3 784 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 GPR180Q86V85 440 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 SLC34A3Q8N130 599 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 POGLUT1Q8NBL1 392 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 OR52N2Q8NGI0 321 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 OR8K3Q8NH51 312 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 AGAP11Q8TF27 550 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 MARVELD3Q96A59 401 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 SENP5Q96HI0 755 aaPredicted RBP17.55■□□□□ 0.4
SSH3-209ENST00000532600 NOL11Q9H8H0 719 aaKnown RBP17.55■□□□□ 0.4
SSH3-209ENST00000532600 TMBIM4Q9HC24 238 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 ZNF446Q9NWS9 450 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 PCTPQ9UKL6 214 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 GRID1Q9ULK0 1009 aa17.55■□□□□ 0.4
SSH3-209ENST00000532600 KLF2Q9Y5W3 355 aaPredicted RBP17.55■□□□□ 0.4
SSH3-209ENST00000532600 CSMD1Q96PZ7 3565 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 A0A1W2PR48 441 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 A0A1W2PS29 197 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 RPS17P08708 135 aaKnown RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 ATP5F1P24539 256 aaPredicted RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 PTX3P26022 381 aaPredicted RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 RAP1GDS1P52306 607 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 TRAF3Q13114 568 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 MPP2Q14168 576 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 C3P1Q6ZMU1 363 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 BNC2Q6ZN30 1099 aaPredicted RBP17.54■□□□□ 0.4
SSH3-209ENST00000532600 C9orf40Q8IXQ3 194 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 GPALPP1Q8IXQ4 340 aa17.54■□□□□ 0.4
SSH3-209ENST00000532600 TCP10LQ8TDR4 215 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms