RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 DUSP26Q9BV47 211 aa14.17□□□□□ -0.14
NXF1-213ENST00000532297 SLC12A9Q9BXP2 914 aa14.17□□□□□ -0.14
NXF1-213ENST00000532297 PAK6Q9NQU5 681 aaPredicted RBP14.17□□□□□ -0.14
NXF1-213ENST00000532297 ACER3Q9NUN7 267 aa14.17□□□□□ -0.14
NXF1-213ENST00000532297 RHCGQ9UBD6 479 aa14.17□□□□□ -0.14
NXF1-213ENST00000532297 ENOPH1Q9UHY7 261 aa14.17□□□□□ -0.14
NXF1-213ENST00000532297 SH2B3Q9UQQ2 575 aa14.17□□□□□ -0.14
NXF1-213ENST00000532297 A0A1W2PRU2 124 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 LYRM1O43325 122 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 GADD45GO95257 159 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 SLC6A12P48065 614 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 MEF2AQ02078 507 aaPredicted RBP14.16□□□□□ -0.14
NXF1-213ENST00000532297 IRF8Q02556 426 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 C1orf52Q8N6N3 182 aaKnown RBP14.16□□□□□ -0.14
NXF1-213ENST00000532297 OR5AK3PQ8NH89 298 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 RAET1EQ8TD07 263 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 ASB11Q8WXH4 323 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 ZC3HAV1LQ96H79 300 aaKnown RBP14.16□□□□□ -0.14
NXF1-213ENST00000532297 NELL2Q99435 816 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 C19orf43Q9BQ61 176 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 C1QTNF7Q9BXJ2 289 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 MRPL9Q9BYD2 267 aaKnown RBP14.16□□□□□ -0.14
NXF1-213ENST00000532297 COMMD3Q9UBI1 195 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 INSL5Q9Y5Q6 135 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 A8MVJ9 347 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 TLR4O00206 839 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 HCN1O60741 890 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 SLC22A5O76082 557 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 OR56A5P0C7T3 313 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 CTRB1P17538 263 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 ETV3P41162 512 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 CLDN20P56880 219 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 LEXMQ3ZCV2 418 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 CTRB2Q6GPI1 263 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 Q6ZVL8 140 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 HSD11B1LQ7Z5J1 315 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 LAS2Q8IYD9 372 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 NANOGP1Q8N7R0 232 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 L3MBTL4Q8NA19 623 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 SLC37A3Q8NCC5 494 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 B3GNT4Q9C0J1 378 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 CORO2BQ9UQ03 480 aa14.16□□□□□ -0.14
NXF1-213ENST00000532297 REV3LO60673 3130 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 LOC102723532A0A0G2JNH3 316 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 C1orf226A1L170 272 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 AGAP14A8MT82 685 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ARHGEF33A8MVX0 844 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ORC5O43913 435 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 C8GP07360 202 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 GSTM1P09488 218 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ETFAP13804 333 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 TNNI3P19429 210 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 HNMTP50135 292 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 MC1RQ01726 317 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ALDH6A1Q02252 535 aaKnown RBP14.15□□□□□ -0.14
NXF1-213ENST00000532297 SP3Q02447 781 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 MLLT11Q13015 90 aaPredicted RBP14.15□□□□□ -0.14
NXF1-213ENST00000532297 NAE1Q13564 534 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 DOC2AQ14183 400 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ZNF385BQ569K4 471 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 TMIGD1Q6UXZ0 262 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 OTOP2Q7RTS6 562 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 MMP21Q8N119 569 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 OR4K3Q96R72 315 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 PIP5K1AQ99755 562 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 PPIL3Q9H2H8 161 aaKnown RBP14.15□□□□□ -0.14
NXF1-213ENST00000532297 BRD9Q9H8M2 597 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 DNAJC11Q9NVH1 559 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 LINC00862A6NCI5 91 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 FAM227AF5H4B4 570 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 PRMT3O60678 531 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 CAV3P56539 151 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 NCF4Q15080 339 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 P2RY14Q15391 338 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ZNF628Q5EBL2 1059 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 MEDAGQ5VYS4 303 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 ANKRD54Q6NXT1 300 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 C22orf39Q6P5X5 142 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 TPRG1Q6ZUI0 275 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 USP30Q70CQ3 517 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 BCDIN3DQ7Z5W3 292 aaKnown RBP14.15□□□□□ -0.14
NXF1-213ENST00000532297 DDX53Q86TM3 631 aaKnown RBP14.15□□□□□ -0.14
NXF1-213ENST00000532297 TIGD4Q8IY51 512 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 AKAP1Q92667 903 aaKnown RBP eCLIP14.15□□□□□ -0.14
NXF1-213ENST00000532297 NMNAT1Q9HAN9 279 aaPredicted RBP14.15□□□□□ -0.14
NXF1-213ENST00000532297 THSD1Q9NS62 852 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 AP1M2Q9Y6Q5 423 aa14.15□□□□□ -0.14
NXF1-213ENST00000532297 PLOD3O60568 738 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 RFPL3O75679 317 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 ZNF250P15622 560 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 PPIBP23284 216 aaKnown RBP14.14□□□□□ -0.15
NXF1-213ENST00000532297 INPP1P49441 399 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 CTSCP53634 463 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 PER3P56645 1201 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 RAE1P78406 368 aaKnown RBP14.14□□□□□ -0.15
NXF1-213ENST00000532297 ABATP80404 500 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 CNIH2Q6PI25 160 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 TAGAPQ8N103 731 aa14.14□□□□□ -0.15
NXF1-213ENST00000532297 SLC43A3Q8NBI5 491 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms