RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 PEX11AO75192 247 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 VPS4BO75351 444 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 DNAJB5O75953 348 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 MYO1DO94832 1006 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 SEC24DO94855 1032 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 SLC35E2P0CK97 266 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 BCKDHAP12694 445 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 DDCP20711 480 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 STT3AP46977 705 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 C21orf58P58505 322 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 AP2B1P63010 937 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 EMX2Q04743 252 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 STX4Q12846 297 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 CHAF1BQ13112 559 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 H3F3CQ6NXT2 135 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 JMJD6Q6NYC1 403 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 MAVSQ7Z434 540 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 WDR75Q8IWA0 830 aaKnown RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 MMP21Q8N119 569 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 ARMC10Q8N2F6 343 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 APCDD1LQ8NCL9 501 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 ELP5Q8TE02 316 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 PSMF1Q92530 271 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 EGLN2Q96KS0 407 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 SIKE1Q9BRV8 207 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 PELOQ9BRX2 385 aaKnown RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 NUF2Q9BZD4 464 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 SEMA4CQ9C0C4 833 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 AKTIPQ9H8T0 292 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 SLCO1B3Q9NPD5 702 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
CPSF1-206ENST00000531480 TNRC6AQ8NDV7 1962 aaKnown RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 FASNP49327 2511 aaKnown RBP13.52□□□□□ -0.25
CPSF1-206ENST00000531480 TRPC5OSA6NMA1 111 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 TGDSO95455 350 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 ATP1B1P05026 303 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 PRPS2P11908 318 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 MAPK1P28482 360 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 SOX11P35716 441 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 ERVK-8P63133 956 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 PLIN5Q00G26 463 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 MAD2L1Q13257 205 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-206ENST00000531480 PDE7AQ13946 482 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 MYBPC3Q14896 1274 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 SPRED3Q2MJR0 410 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 GALNTL6Q49A17 601 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 CRLF3Q8IUI8 442 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 OR4N5Q8IXE1 308 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 KBTBD2Q8IY47 623 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 EXD3Q8N9H8 876 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 MORN4Q8NDC4 146 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 B3GNT7Q8NFL0 401 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 OR4K14Q8NGD5 310 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 OR14A16Q8NHC5 309 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 STON2Q8WXE9 905 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 CNRIP1Q96F85 164 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-206ENST00000531480 SMAD5Q99717 465 aaKnown RBP13.51□□□□□ -0.25
CPSF1-206ENST00000531480 LHPPQ9H008 270 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 ZNF552Q9H707 407 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-206ENST00000531480 PSME2Q9UL46 239 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 PCDHGB7Q9Y5F8 929 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 KALRNO60229 2985 aa13.51□□□□□ -0.25
CPSF1-206ENST00000531480 A0A1W2PS29 197 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 ATXN7O15265 892 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 KLHL41O60662 606 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 DDAH2O95865 285 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 FAM107AO95990 144 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 IGKV3-11P04433 115 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 CPMP14384 443 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 PCSK2P16519 638 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 PIK3R1P27986 724 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 SOX18P35713 384 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 ASMTP46597 345 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 GYS2P54840 703 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 ID2Q02363 134 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 ACTN3Q08043 901 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 KCNAB2Q13303 367 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 TCTN3Q6NUS6 607 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 IGFL2Q6UWQ7 119 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 DGAT2L6Q6ZPD8 337 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 SAMD14Q8IZD0 417 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 AMER2Q8N7J2 671 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 FNDC5Q8NAU1 212 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 FDCSPQ8NFU4 85 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 SLC39A7Q92504 469 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 DAZLQ92904 295 aaKnown RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 MTERF3Q96E29 417 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 NUDT9Q9BW91 350 aa13.5□□□□□ -0.25
CPSF1-206ENST00000531480 PNO1Q9NRX1 252 aaKnown RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 NOP53Q9NZM5 478 aaKnown RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 MARCOQ9UEW3 520 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 ZNF223Q9UK11 482 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-206ENST00000531480 USH1CQ9Y6N9 552 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms