RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 OR1C1Q15619 314 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 TNFAIP8L3Q5GJ75 292 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 C10orf62Q5T681 223 aaPredicted RBP17.42■□□□□ 0.38
GMDS-208ENST00000530927 MDS2Q8NDY4 140 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 ZNF721Q8TF20 911 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 TM4SF18Q96CE8 201 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 SMC6Q96SB8 1091 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 EBPLQ9BY08 206 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 CLMPQ9H6B4 373 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 AHSPQ9NZD4 102 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 ADAM29Q9UKF5 820 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 FIS1Q9Y3D6 152 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 FLNCQ14315 2725 aa17.42■□□□□ 0.38
GMDS-208ENST00000530927 TRIM13O60858 407 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 WISP2O76076 250 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 GPR75O95800 540 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 ALOX15P16050 662 aaPredicted RBP17.41■□□□□ 0.38
GMDS-208ENST00000530927 ARRB2P32121 409 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 OC90Q02509 493 aaPredicted RBP17.41■□□□□ 0.38
GMDS-208ENST00000530927 DUSP2Q05923 314 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 SRSF1Q07955 248 aaKnown RBP eCLIP17.41■□□□□ 0.382e-13■■■■□ 22.3
GMDS-208ENST00000530927 CSTF3Q12996 717 aaKnown RBP17.41■□□□□ 0.38
GMDS-208ENST00000530927 PAGE2Q7Z2X7 111 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 OR14A16Q8NHC5 309 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 DAZLQ92904 295 aaKnown RBP17.41■□□□□ 0.38
GMDS-208ENST00000530927 SH3GL2Q99962 352 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 UTP23Q9BRU9 249 aaKnown RBP17.41■□□□□ 0.38
GMDS-208ENST00000530927 STK38LQ9Y2H1 464 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 MYO18BQ8IUG5 2567 aa17.41■□□□□ 0.38
GMDS-208ENST00000530927 BLACEA4D250 179 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 TMEM233B4DJY2 109 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 WWP2O00308 870 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 ZNF354AO60765 605 aaPredicted RBP17.4■□□□□ 0.38
GMDS-208ENST00000530927 PRAMEF2O60811 474 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 VPS4BO75351 444 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 NEURL1O76050 574 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 ZNF766Q5HY98 468 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 AGBL2Q5U5Z8 902 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 CES4AQ5XG92 561 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 OR52E8Q6IFG1 317 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 EXOC3L1Q86VI1 746 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 MORN4Q8NDC4 146 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 BARD1Q99728 777 aaKnown RBP17.4■□□□□ 0.38
GMDS-208ENST00000530927 CNPPD1Q9BV87 410 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 HEY2Q9UBP5 337 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 VPS4AQ9UN37 437 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 ACTL7BQ9Y614 415 aa17.4■□□□□ 0.38
GMDS-208ENST00000530927 CRCPO75575 148 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 ITGA10O75578 1167 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 CT62P0C5K7 136 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 HSD3B1P14060 373 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 HSD3B2P26439 372 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 ERVK-8P63133 956 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 PLIN5Q00G26 463 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 ATCAYQ86WG3 371 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 AGR3Q8TD06 166 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 SENP5Q96HI0 755 aaPredicted RBP17.39■□□□□ 0.38
GMDS-208ENST00000530927 WDR41Q9HAD4 459 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 LRFN1Q9P244 771 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 ABI3Q9P2A4 366 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 MID2Q9UJV3 735 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 CES1P1Q9UKY3 287 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 ERVK-19Q9WJR5 959 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 PCDHA9Q9Y5H5 950 aa17.39■□□□□ 0.38
GMDS-208ENST00000530927 PCDH7O60245 1069 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 OR10H2O60403 315 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 OR2J2O76002 312 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ZFAND5O76080 213 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 CLPSP04118 112 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 IGKV3-11P04433 115 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ETV4P43268 484 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ALDH9A1P49189 494 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 HK2P52789 917 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 MPP2Q14168 576 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ZNF267Q14586 743 aaPredicted RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 EIF2S3LQ2VIR3 472 aaKnown RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 HSDL2Q6YN16 418 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 C9orf40Q8IXQ3 194 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ST13P4Q8IZP2 240 aaPredicted RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 LGI4Q8N135 537 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ARMC10Q8N2F6 343 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 GALNT11Q8NCW6 608 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 C11orf24Q96F05 449 aaPredicted RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 RBM18Q96H35 190 aaKnown RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 TUBB1Q9H4B7 451 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 WDR91A4D1P6 747 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 CBX6O95503 412 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 IL3P08700 152 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 COX7A2P14406 83 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 PIK3R1P27986 724 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 SSTR4P31391 388 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 FEN1P39748 380 aaKnown RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 XKP51811 444 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 RNF4P78317 190 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 ARL13AQ5H913 290 aaPredicted RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 SPDYAQ5MJ70 313 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 RPUSD3Q6P087 351 aaKnown RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 GALNTL5Q7Z4T8 443 aa17.38■□□□□ 0.37
GMDS-208ENST00000530927 GBP7Q8N8V2 638 aaPredicted RBP17.38■□□□□ 0.37
GMDS-208ENST00000530927 OR4K14Q8NGD5 310 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms