RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NNATQ16517 81 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 ARMC4Q5T2S8 1044 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 FAM180BQ6P0A1 224 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 MZT2AQ6P582 158 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 SYCE2Q6PIF2 218 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 IL22RA1Q8N6P7 574 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 PROKR1Q8TCW9 393 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 DOK4Q8TEW6 326 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 ALG14Q96F25 216 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 PDXPQ96GD0 296 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 CMTM6Q9NX76 183 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 MAU2Q9Y6X3 613 aa14.34□□□□□ -0.11
USP47-207ENST00000527733 PSME4Q14997 1843 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 PARP14Q460N5 1801 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 TRBV5-4A0A0C4DH59 114 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 POM121BA6NF01 834 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 RDH16O75452 317 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 GGT1P19440 569 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 ENDOUP21128 410 aaKnown RBP14.33□□□□□ -0.11
USP47-207ENST00000527733 PSMA1P25786 263 aaKnown RBP14.33□□□□□ -0.11
USP47-207ENST00000527733 GSTT1P30711 240 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 MC1RQ01726 317 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 LCN1P1Q5VSP4 162 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 CXXC5Q7LFL8 322 aaKnown RBP14.33□□□□□ -0.11
USP47-207ENST00000527733 UBALD2Q8IYN6 164 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 CD180Q99467 661 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 LPAR4Q99677 370 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 AMBNQ9NP70 447 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 RHCGQ9UBD6 479 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 SRPK3Q9UPE1 567 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 MGAT4BQ9UQ53 548 aa14.33□□□□□ -0.11
USP47-207ENST00000527733 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 CSTAP01040 98 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 SMSP52788 366 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 MAZP56270 477 aaKnown RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 MRPS15P82914 257 aaKnown RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 C16orf72Q14CZ0 275 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 TRIQKQ629K1 86 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 FBXO27Q8NI29 283 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 TESCQ96BS2 214 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 TMEM19Q96HH6 336 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 SH3GL3Q99963 347 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 VAPAQ9P0L0 249 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 TMEM5Q9Y2B1 443 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 GABRR3A8MPY1 467 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 ALDOCP09972 364 aaKnown RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 CDKN3Q16667 212 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 UGT3A2Q3SY77 523 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 COLEC12Q5KU26 742 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 NLRP8Q86W28 1048 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 RNF175Q8N4F7 328 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 OR52P1PQ8NH57 321 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 TANKQ92844 425 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 RELTQ969Z4 430 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 SH3YL1Q96HL8 342 aaPredicted RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 IL4I1Q96RQ9 567 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 RPP25Q9BUL9 199 aaKnown RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 PTGES2Q9H7Z7 377 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 SRPX2O60687 465 aaPredicted RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 KLHL18O94889 574 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 CCDC159P0C7I6 412 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 MRPL28Q13084 256 aaKnown RBP14.33□□□□□ -0.12
USP47-207ENST00000527733 RGNQ15493 299 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 CYP27C1Q4G0S4 372 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 FAM217AQ8IXS0 508 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 METTL4Q8N3J2 472 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 FOXQ1Q9C009 403 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 HDHD2Q9H0R4 259 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 ZNF451Q9Y4E5 1061 aa14.33□□□□□ -0.12
USP47-207ENST00000527733 TP53I11O14683 189 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 PLCXD2Q0VAA5 305 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 CCINQ13939 588 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 LAPTM4AQ15012 233 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 CCDC103Q8IW40 242 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 OR2L3Q8NG85 312 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 FRS2Q8WU20 508 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 IPCEF1Q8WWN9 437 aaPredicted RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 TMEM125Q96AQ2 219 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 ACTRT3Q9BYD9 372 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 YTHDF1Q9BYJ9 559 aaKnown RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 NLGN3Q9NZ94 848 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 ANHXE9PGG2 379 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 POLR1CO15160 346 aaPredicted RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 TAPBPO15533 448 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 DCNP07585 359 aaKnown RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 CISD3P0C7P0 127 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 RORAP35398 523 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 RANBP1P43487 201 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 PTGES3Q15185 160 aaKnown RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 LIN52Q52LA3 116 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 PYCR3Q53H96 274 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 PIP5KL1Q5T9C9 394 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 OR5L2Q8NGL0 311 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 RDH12Q96NR8 316 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 LOC100130705A0A1B0GUX0 176 aa14.32□□□□□ -0.12
USP47-207ENST00000527733 PRR23D1E9PI22 279 aaPredicted RBP14.32□□□□□ -0.12
USP47-207ENST00000527733 RENP00797 406 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms