RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 CAPSLQ8WWF8 208 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 RAB7BQ96AH8 199 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 CIDECQ96AQ7 238 aaPredicted RBP4.88□□□□□ -1.63
C11orf54-203ENST00000526335 SORT1Q99523 831 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 RAD9AQ99638 391 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 NPAS1Q99742 590 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 HSD17B14Q9BPX1 270 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 CLSTN3Q9BQT9 956 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 TMEM121Q9BTD3 319 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 THUMPD3Q9BV44 507 aaKnown RBP4.88□□□□□ -1.63
C11orf54-203ENST00000526335 HDHD5Q9BXW7 423 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 TRIM15Q9C019 465 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 ZNF385DQ9H6B1 395 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 MARCH7Q9H992 704 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 WDR41Q9HAD4 459 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 ANKHQ9HCJ1 492 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 XPNPEP1Q9NQW7 623 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 DIABLOQ9NR28 239 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 NPAP1Q9NZP6 1156 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 PAK5Q9P286 719 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 KLHL9Q9P2J3 617 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 EIF3LQ9Y262 564 aaKnown RBP4.88□□□□□ -1.63
C11orf54-203ENST00000526335 RBMX2Q9Y388 322 aaKnown RBP4.88□□□□□ -1.63
C11orf54-203ENST00000526335 HS3ST3B1Q9Y662 390 aa4.88□□□□□ -1.63
C11orf54-203ENST00000526335 NAV1Q8NEY1 1877 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 MN1Q10571 1320 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ARFGEF1Q9Y6D6 1849 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RGPD3A6NKT7 1758 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RGPD4Q7Z3J3 1758 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TCRBV7S3A2A0A539 114 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 GAGE10A6NGK3 116 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 NPIPB5A8MRT5 1133 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 KPNA7A9QM74 516 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 B4DGG1 531 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 NPIPB4C9JG80 1138 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 APOC4-APOC2K7ER74 178 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 PSMD11O00231 422 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TO15178 435 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 MSH4O15457 936 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 CFLARO15519 480 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 GATCO43716 136 aaKnown RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 LYPLA1O75608 230 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ZMPSTE24O75844 475 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 VAPBO95292 243 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 METTL18O95568 372 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TOMM40O96008 361 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 OTCP00480 354 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 APOC2P02655 101 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 STAG3L3P0CL85 134 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 NR2F1P10589 423 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ENO3P13929 434 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ZNF182P17025 639 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 PRPH2P23942 346 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 CXCR2P25025 360 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 HMGB2P26583 209 aaKnown RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RRM2P31350 389 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ICAM3P32942 547 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 PCGF2P35227 344 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 GJC1P36383 396 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 NUDT1P36639 197 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 OPRL1P41146 370 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RABIFP47224 123 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 SERPINB10P48595 397 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RGS7P49802 495 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 AGTR2P50052 363 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 JAK3P52333 1124 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RAD23AP54725 363 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 PSME3P61289 254 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 RPL10AP62906 217 aaKnown RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 GAD2Q05329 585 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ILF2Q12905 390 aaKnown RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 NME3Q13232 169 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 KRR1Q13601 381 aaKnown RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 PCLAFQ15004 111 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 MED22Q15528 200 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TSC22D1Q15714 1073 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ATP6AP1Q15904 470 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 AWAT1Q58HT5 328 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 SAPCD1Q5SSQ6 148 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 N4BP2L1Q5TBK1 243 aaPredicted RBP4.87□□□□□ -1.63
C11orf54-203ENST00000526335 FAM171BQ6P995 826 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TMEM65Q6PI78 240 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ZCCHC23Q6ZST2 131 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 FJX1Q86VR8 437 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 TPRA1Q86W33 373 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 KIAA2013Q8IYS2 634 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 SFRP1Q8N474 314 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 PLD5Q8N7P1 536 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 CCNYL1Q8N7R7 359 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 LEMD2Q8NC56 503 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 SLC44A5Q8NCS7 719 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ZNF680Q8NEM1 530 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 BEST2Q8NFU1 509 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ZNF461Q8TAF7 563 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ZNF671Q8TAW3 534 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 ACTL9Q8TC94 416 aa4.87□□□□□ -1.63
C11orf54-203ENST00000526335 HCAR2Q8TDS4 363 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms