RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 EN2P19622 333 aaPredicted RBP10.05□□□□□ -0.8
CTSC-203ENST00000524463 PRDX6P30041 224 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 PTGR1Q14914 329 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 RAB6CQ53S08 254 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 TMEM236Q5W0B7 351 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 LYSMD4Q5XG99 296 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 OR4C11Q6IEV9 310 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 HACD2Q6Y1H2 254 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 UBE2Q1Q7Z7E8 422 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ZER1Q7Z7L7 766 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 PLXDC1Q8IUK5 500 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 RAB6CQ9H0N0 254 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 HAO2Q9NYQ3 351 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ZNF840PA6NDX5 716 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ATF4P18848 351 aaPredicted RBP10.05□□□□□ -0.8
CTSC-203ENST00000524463 GSTM3P21266 225 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 FIGLAQ6QHK4 219 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
CTSC-203ENST00000524463 TRAM1L1Q8N609 369 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 THAP6Q8TBB0 222 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 CCDC107Q8WV48 283 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 SAMD11Q96NU1 681 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 NUDT15Q9NV35 164 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 AASSQ9UDR5 926 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ERCC1P07992 297 aaPredicted RBP10.05□□□□□ -0.8
CTSC-203ENST00000524463 TNFRSF1BP20333 461 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 S1PR1P21453 382 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 UQCRC2P22695 453 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ELK4P28324 431 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 SLC18A2Q05940 514 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 NIPAL4Q0D2K0 466 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 LTC4SQ16873 150 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 ZNF678Q5SXM1 525 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 TAS1R1Q7RTX1 841 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 C16orf70Q9BSU1 422 aa10.05□□□□□ -0.8
CTSC-203ENST00000524463 NAA11Q9BSU3 229 aaPredicted RBP10.05□□□□□ -0.8
CTSC-203ENST00000524463 ZNF888P0CJ79 500 aaPredicted RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 C1GALT1C1LP0DN25 315 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 SLC2A5P22732 501 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 GSK3BP49841 420 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 CDNFQ49AH0 187 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 C6orf132Q5T0Z8 1188 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 LHFPL3Q86UP9 236 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 OR51L1Q8NGJ5 315 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 PROKR1Q8TCW9 393 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 TMEM80Q96HE8 168 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 METTL2AQ96IZ6 378 aaKnown RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 SORBS1Q9BX66 1292 aaKnown RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 EBLN1P0CF75 366 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 GDF1P27539 372 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 MAP2K4P45985 399 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 ACADVLP49748 655 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 GPX6P59796 221 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 FAM205BPQ63HN1 556 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 KIAA0895LQ68EN5 471 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 COMTD1Q86VU5 262 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 TP53INP2Q8IXH6 220 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 NIPA2Q8N8Q9 360 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 NEDD4LQ96PU5 975 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 RNF215Q9Y6U7 377 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 HRGP04196 525 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 ADRB3P13945 408 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 GTF2F2P13984 249 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 S100A2P29034 98 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 SOX3P41225 446 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 DIO3P55073 304 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 HNRNPA0Q13151 305 aaKnown RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 GINS1Q14691 196 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 ALG10BQ5I7T1 473 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 SWT1Q5T5J6 900 aaKnown RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 EMC10Q5UCC4 262 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTSC-203ENST00000524463 ZNF554Q86TJ5 538 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 ALDH16A1Q8IZ83 802 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 PQLC3Q8N755 202 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 SYT14Q8NB59 555 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 OR52P1PQ8NH57 321 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 POP5Q969H6 163 aaKnown RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 ARRDC3Q96B67 414 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 CRB3Q9BUF7 120 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 MED11Q9P086 117 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 SUSD2Q9UGT4 822 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 VSTM2BA6NLU5 285 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 DISC1C4P0D8 188 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 PIRO00625 290 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 ETV5P41161 510 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 CDKN2DP55273 166 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 RHDQ02161 417 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 GALNT2Q10471 571 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 GRB7Q14451 532 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 ABRAXAS2Q15018 415 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 CDCA2Q69YH5 1023 aaPredicted RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 LEG1Q6P5S2 330 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 OR52E2Q8NGJ4 325 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 FAM46AQ96IP4 442 aaKnown RBP10.04□□□□□ -0.8
CTSC-203ENST00000524463 PKP2Q99959 881 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 CDH20Q9HBT6 801 aa10.04□□□□□ -0.8
CTSC-203ENST00000524463 LSM1O15116 133 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms