RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GJA8P48165 433 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 NR0B2Q15466 257 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 UNC50Q53HI1 259 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 OR6C4Q8NGE1 309 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 PKP2Q99959 881 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 CLSTN3Q9BQT9 956 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC46A2Q9BY10 475 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 HAPLN2Q9GZV7 340 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 PREBQ9HCU5 417 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC7A11Q9UPY5 501 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 EXOSC1Q9Y3B2 195 aaKnown RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 P2RY2P41231 377 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 PPP1R8Q12972 351 aaKnown RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 TMIEQ8NEW7 156 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 CEP76Q8TAP6 659 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 FKBP10Q96AY3 582 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 FBXL8Q96CD0 374 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 RDH12Q96NR8 316 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 NSUN5Q96P11 429 aaKnown RBP15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 MCOLN1Q9GZU1 580 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 EHD1Q9H4M9 534 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 MKS1Q9NXB0 559 aa15.54■□□□□ 0.08
PCDHA3-201ENST00000522353 FAM189A1O60320 539 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 FGF3P11487 239 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 NUDT6P53370 316 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC27A4Q6P1M0 643 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 RANBP10Q6VN20 620 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 LARP4Q71RC2 724 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 DPPA4Q7L190 304 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 ERI1Q8IV48 349 aaKnown RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 OR2T33Q8NG76 320 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 MOV10Q9HCE1 1003 aaKnown RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 CDC40O60508 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 PRAMEF2O60811 474 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 H2BFMP0C1H6 154 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SIM1P81133 766 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 DLX2Q07687 328 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 KIR2DS3Q14952 304 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SPIN3Q5JUX0 258 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 NANOGP8Q6NSW7 305 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 TCEANCQ8N8B7 351 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM41AQ96HV5 264 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 NANOGQ9H9S0 305 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 MED11Q9P086 117 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 C5orf51A6NDU8 294 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 ALDOAP04075 364 aaKnown RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 GSTM2P28161 218 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 TAS2R38P59533 333 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 CES4AQ5XG92 561 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 GPR137CQ8N3F9 429 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM80Q96HE8 168 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 HSPA12BQ96MM6 686 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 TTYH2Q9BSA4 534 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 DOHHQ9BU89 302 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 MROQ9BYG7 248 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SMURF1Q9HCE7 757 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SEC14L4Q9UDX3 406 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 PCDHGA10Q9Y5H3 936 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 PMF1-BGLAPU3KQ54 211 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 KAT6AQ92794 2004 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 CLPXO76031 633 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 INMTO95050 263 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 PSKH1P11801 424 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 CD6P30203 668 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 PXNP49023 591 aaPredicted RBP15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 GINS1Q14691 196 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 TUBA3EQ6PEY2 450 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 SGTBQ96EQ0 304 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 RHCGQ9UBD6 479 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 PLEKHA6Q9Y2H5 1048 aa15.53■□□□□ 0.08
PCDHA3-201ENST00000522353 S100A1P23297 94 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC9A3P48764 834 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 UBE2NP61088 152 aaKnown RBP15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 CARTPTQ16568 116 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 CDKL4Q5MAI5 379 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 ZNF613Q6PF04 617 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 TOMM5Q8N4H5 51 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 FAM174AQ8TBP5 190 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 TM9SF4Q92544 642 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM203Q969S6 136 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 TMEM121BQ9BXQ6 578 aaPredicted RBP15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 IL17CQ9P0M4 197 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 RTCAO00442 366 aaKnown RBP15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 PRH1P02810 166 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 CDKN2DP55273 166 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 CLCA4Q14CN2 919 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 STRA6Q9BX79 667 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 CDH10Q9Y6N8 788 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 FTCDNL1E5RQL4 147 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 NUAK1O60285 661 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC16A8O95907 504 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 CD72P21854 359 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 TSTQ16762 297 aaKnown RBP15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 C4orf46Q504U0 113 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 STEAP4Q687X5 459 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 SLC44A3Q8N4M1 653 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 MTG2Q9H4K7 406 aa15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 EIF3KQ9UBQ5 218 aaKnown RBP15.52■□□□□ 0.08
PCDHA3-201ENST00000522353 RGPD8O14715 1765 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms