RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PANX3Q96QZ0 392 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 TTC1Q99614 292 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 FERMT1Q9BQL6 677 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 SPNS1Q9H2V7 528 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 DDX56Q9NY93 547 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 CLCF1Q9UBD9 225 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 LCMT1Q9UIC8 334 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 RIMKLBQ9ULI2 386 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 MMACHCQ9Y4U1 282 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 APOC4-APOC2K7ER74 178 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR10H2O60403 315 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 TRAPPC6AO75865 159 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 ETHE1O95571 254 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 TGM6O95932 706 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 APOC2P02655 101 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 GSTP1P09211 210 aaKnown RBP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 IGHV4-31P0DP07 118 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 CDH1P12830 882 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 NPPBP16860 134 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 COMTP21964 271 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 GDF1P27539 372 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 MTTPP55157 894 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 TBPL1P62380 186 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 BMPR2Q13873 1038 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 SF3B4Q15427 424 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 PARP6Q2NL67 630 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 FAM120AOSQ5T036 256 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 LIPNQ5VXI9 398 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 BICRALQ6AI39 1079 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 VWA1Q6PCB0 445 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 CLNKQ7Z7G1 428 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR4K1Q8NGD4 311 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 NT5CQ8TCD5 201 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 AKAP1Q92667 903 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 ABTB1Q969K4 478 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 SPACA9Q96E40 222 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 QRFPRQ96P65 431 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 FAM129AQ9BZQ8 928 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR8D2Q9GZM6 311 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 OPN3Q9H1Y3 402 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 C7orf69Q9H7B7 122 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 LRRC40Q9H9A6 602 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 CLK4Q9HAZ1 481 aaKnown RBP8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 ADAP2Q9NPF8 381 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 HOMER3Q9NSC5 361 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 LIPT1Q9Y234 373 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 IKBKGQ9Y6K9 419 aa8.03□□□□□ -1.12
TRAPPC9-212ENST00000521944 FAM234BA2RU67 622 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ZNF839A8K0R7 811 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 C16orf97H3BN30 126 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CD3EAPO15446 510 aaKnown RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 OR1F1O43749 312 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 LMX1BO60663 402 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 SYF2O95926 243 aaKnown RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CGAP01215 116 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 IGLV1-40P01703 118 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CD8AP01732 235 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CATP04040 527 aaKnown RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 RBP3P10745 1247 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CPN1P15169 458 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ZNF16P17020 682 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ITGA2P17301 1181 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ARNTP27540 789 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 HNF4AP41235 474 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 DIO3P55073 304 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 LOXL1Q08397 574 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ELAVL1Q15717 326 aaKnown RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ASTE1Q2TB18 679 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 PRR31Q5SQ13 230 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 DNAJC14Q6Y2X3 702 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 TC2NQ8N9U0 490 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ANKRD53Q8N9V6 530 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 MORN4Q8NDC4 146 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ABHD11Q8NFV4 315 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 RAB3IL1Q8TBN0 382 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 SLC2A12Q8TD20 617 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 ZNF721Q8TF20 911 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CTNNBL1Q8WYA6 563 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CTHRC1Q96CG8 243 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 TRMT61AQ96FX7 289 aaKnown RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 FAM111AQ96PZ2 611 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 TM9SF2Q99805 663 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 DOHHQ9BU89 302 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 NUP62CLQ9H1M0 184 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 GOLPH3Q9H4A6 298 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 PRTFDC1Q9NRG1 225 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 FAM114A2Q9NRY5 505 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CATSPERZQ9NTU4 200 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 HEY2Q9UBP5 337 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 VTI1BQ9UEU0 232 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 MED16Q9Y2X0 877 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 PCDHA13Q9Y5I0 950 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 MAGED1Q9Y5V3 778 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 CMYA5Q8N3K9 4069 aa8.02□□□□□ -1.13
TRAPPC9-212ENST00000521944 HRKO00198 91 aa8.01□□□□□ -1.13
TRAPPC9-212ENST00000521944 PSMD12O00232 456 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC9-212ENST00000521944 EIF3FO00303 357 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC9-212ENST00000521944 CYR61O00622 381 aa8.01□□□□□ -1.13
TRAPPC9-212ENST00000521944 AVILO75366 819 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms