RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C17orf107Q6ZR85 190 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 BRINP3Q76B58 766 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 GALNT5Q7Z7M9 940 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 DDX53Q86TM3 631 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTRH1Q86Y79 214 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMC8Q8IU68 726 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADHFE1Q8IWW8 467 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRIM48Q8IWZ4 208 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CMTR2Q8IYT2 770 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NLGN4XQ8N0W4 816 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF283Q8N7M2 679 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NANOGP1Q8N7R0 232 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 C7orf31Q8N865 590 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 RCBTB1Q8NDN9 531 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2L3Q8NG85 312 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR8D4Q8NGM9 314 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR9Q1Q8NGQ5 310 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR10J5Q8NHC4 309 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC20A1Q8WUM9 679 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ASB13Q8WXK3 278 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 KCTD13Q8WZ19 329 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 HAS1Q92839 578 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 OSTF1Q92882 214 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARMC5Q96C12 935 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNF31Q96EP0 1072 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 EEF2KMTQ96G04 330 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 C14orf144Q96I85 54 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPP1R36Q96LQ0 422 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NEDD4LQ96PU5 975 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLITRK1Q96PX8 696 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 RBP7Q96R05 134 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 KLF6Q99612 283 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 C19orf43Q9BQ61 176 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 WDR77Q9BQA1 342 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADPGKQ9BRR6 497 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 AARSD1Q9BTE6 412 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 H2AFJQ9BTM1 129 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TEX12Q9BXU0 123 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRIM54Q9BYV2 358 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 MRPL37Q9BZE1 423 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF541Q9H0D2 1346 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TOLLIPQ9H0E2 274 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 HDHD2Q9H0R4 259 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PIGMQ9H3S5 423 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF768Q9H5H4 540 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF385DQ9H6B1 395 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 HEXA-AS1Q9H8Q6 139 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 EML4Q9HC35 981 aaKnown RBP4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM8AQ9HCN3 771 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SIX2Q9NPC8 291 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM138Q9NPI0 162 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACOT13Q9NPJ3 140 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 MED17Q9NVC6 651 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PNPOQ9NVS9 261 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ELOVL2Q9NXB9 296 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 MTMR10Q9NXD2 777 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 NKIRAS2Q9NYR9 191 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 FEM1BQ9UK73 627 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC22A14Q9Y267 594 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 GOLT1BQ9Y3E0 138 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 CMAHPQ9Y471 501 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCDHA2Q9Y5H9 948 aa4.59□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADAMTS12P58397 1594 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 A2ML1A8K2U0 1454 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CNTNAP2Q9UHC6 1331 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CCDC195A0A1B0GUA6 201 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 IQCMA0A1B0GVH7 501 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 A0A1W2PQ09 198 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 METTL21EPA6NDL7 271 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FABP12A6NFH5 140 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PP2D1A8MPX8 630 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 DISC1C4P0D8 188 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 NEDD8-MDP1E9PL57 170 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CBX4O00257 560 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 WWP2O00308 870 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ANKRD28O15084 1053 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PGRMC2O15173 223 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 EIF3DO15371 548 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRKAB2O43741 272 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 DLX3O60479 287 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 EFCAB14O75071 495 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 MED6O75586 246 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 LYPLA1O75608 230 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 RECQL4O94761 1208 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 ATG12O94817 140 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBXN7O94888 489 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PROSCO94903 275 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 F10P00742 488 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SERPINA1P01009 418 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 SERPINA3P01011 423 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HLA-DQB1P01920 261 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 CRHP06850 196 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 FGF4P08620 206 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HIST1H2AGP0C0S8 130 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 UQCRFS1P1P0C7P4 283 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAP2AP10114 183 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HIST1H2ADP20671 130 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 HNF1AP20823 631 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRPS1L1P21108 318 aa4.58□□□□□ -1.68
HMGB1P19-201ENST00000517578 IGFBP5P24593 272 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms