RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 IGLV4-3A0A075B6K6 122 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TRAV9-2A0A087WT02 112 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A087WZG4 1122 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TRGV1A0A0A0MS02 117 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A0A6YYH2 397 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A0J9YW62 118 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1B0GVG6 124 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1B0GVI7 797 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1W2PP55 124 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SSU72P8A0A1W2PR75 194 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1W2PRD5 423 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1W2PRF3 423 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1W2PRG0 241 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A0A1W2PRM7 423 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAM234BA2RU67 622 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRRD1A4D1F6 860 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RNF222A6NCQ9 220 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRIT2A6NDA9 550 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RCCD1A6NED2 376 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GRXCR2A6NFK2 248 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OR6C70A6NIJ9 312 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A6NJ64 397 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DUXAA6NLW8 204 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 C15orf61A6NNL5 157 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 A8MXQ7 604 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MINDY4BA8MYZ0 360 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF736B4DX44 427 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 C9IYK1 514 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 C19orf81C9J6K1 198 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CLDN25C9JDP6 229 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FNDC10F2Z333 226 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LMO7DNF2Z398 122 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LYNX1G3V0Z9 82 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 QSOX1O00391 747 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GABRPO00591 440 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SOCS6O14544 535 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ABCD4O14678 606 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TRDMT1O14717 391 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CLIC2O15247 247 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HOXC11O43248 304 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 AKAP10O43572 662 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC37A4O43826 429 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PIP5K1CO60331 668 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYTIPO60759 359 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PRAMEF2O60811 474 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 XYLBO75191 536 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ENTPD5O75356 428 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PRPF40AO75400 957 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ERN1O75460 977 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CREG1O75629 220 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PALMO75781 387 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PSMD10O75832 226 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CDK14O94921 469 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TRIM37O94972 964 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 VAMP5O95183 116 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KAT7O95251 611 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ADCY5O95622 1261 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CDS2O95674 445 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GPR75O95800 540 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ANGPTL1O95841 491 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MT-CO1P00395 513 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NGFP01138 241 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GNRH1P01148 92 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 INSP01308 110 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CHRNA1P02708 482 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TFP02787 698 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 OPN1SWP03999 348 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYP11A1P05108 521 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LIPFP07098 398 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CAPN1P07384 714 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PFN1P07737 140 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PLEKP08567 350 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYC1P08574 325 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC35G6P0C7Q6 338 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GIMD1P0DJR0 217 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 C1GALT1C1LP0DN25 315 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PPIAL4GP0DN37 164 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGHV1-8P0DP01 117 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IGHV4-30-4P0DP06 118 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RBP3P10745 1247 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 APEHP13798 732 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HSD3B1P14060 373 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GABRA1P14867 456 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PHKG2P15735 406 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DDX5P17844 614 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CDH2P19022 906 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PSMB1P20618 241 aaKnown RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PRKACGP22612 351 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FPR3P25089 353 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMOD1P28289 359 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BLVRBP30043 206 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SSTR2P30874 369 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HOXA9P31269 272 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FMO3P31513 532 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GTF2F1P35269 517 aaKnown RBP eCLIP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CEACAM6P40199 344 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IL15P40933 162 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC1A4P43007 532 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MAGEA4P43358 317 aa-0.83□□□□□ -2.54
SCARNA20.2-201ENST00000516052 YAP1P46937 504 aaKnown RBP-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms