RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 KDELR3O43731 214 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SUPT7LO94864 414 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 NSA2O95478 260 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ACSM4P0C7M7 580 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CBSLP0DN79 551 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PKMP14618 531 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 HMGA1P17096 107 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MSX1P28360 303 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CBSP35520 551 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CAPGP40121 348 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MAP2K4P45985 399 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 KCNJ3P48549 501 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PER3P56645 1201 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ASAH1Q13510 395 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FASTKQ14296 549 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 USF2Q15853 346 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC8B1Q6J4K2 584 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC36A4Q6YBV0 504 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CHST15Q7LFX5 561 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 R3HCC1LQ7Z5L2 792 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 LHFPL3Q86UP9 236 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FAM126BQ8IXS8 530 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TRAM1L1Q8N609 369 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PTGR2Q8N8N7 351 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TMEM102Q8N9M5 508 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FAM110BQ8TC76 370 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PHOSPHO1Q8TCT1 267 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 UBASH3BQ8TF42 649 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 C2CD4CQ8TF44 421 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 NXPE2Q96DL1 559 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF514Q96K75 400 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ZSWIM3Q96MP5 696 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TCEAL7Q9BRU2 100 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 IFT27Q9BW83 186 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 IL1RL2Q9HB29 575 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 GALPQ9UBC7 116 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 HELZP42694 1942 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF840PA6NDX5 716 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 HTRA2O43464 458 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 HCRTR2O43614 444 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MRPS14O60783 128 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SEC14L2O76054 403 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CBR1P16152 277 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 GPX3P22352 226 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 PSME3P61289 254 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SKP1P63208 163 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ARF5P84085 180 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FADDQ13158 208 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 DYRK1AQ13627 763 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MRNIPQ6NTE8 343 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ABI1Q8IZP0 508 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SVOPLQ8N434 492 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 RYBPQ8N488 228 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 YIPF7Q8N8F6 280 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TTC16Q8NEE8 873 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 FAR1Q8WVX9 515 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CYGBQ8WWM9 190 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 KIAA1191Q96A73 305 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 RFT1Q96AA3 541 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ASB9Q96DX5 294 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC30A3Q99726 388 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 CHCHD6Q9BRQ6 235 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TMEM175Q9BSA9 504 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 C1QTNF6Q9BXI9 259 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 TRIM54Q9BYV2 358 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 RASSF1Q9NS23 344 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 MCUBQ9NWR8 336 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 GHRLQ9UBU3 117 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 ELF5Q9UKW6 265 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 OGDHLQ9ULD0 1010 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 STARD10Q9Y365 291 aa7.14□□□□□ -1.27
PDLIM5-219ENST00000514743 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 PRORSD1PA6NEY8 169 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 METTL15A6NJ78 407 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 KRBOX1C9JBD0 128 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 INSIG1O15503 277 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 STC2O76061 302 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 TSPAN12O95859 305 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 RPS3P23396 243 aaKnown RBP eCLIP7.13□□□□□ -1.271e-8■■■■□ 20.5
PDLIM5-219ENST00000514743 ATP4BP51164 291 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 YBX1P67809 324 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 FOXO1Q12778 655 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 TRAM1Q15629 374 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 ATP13A5Q4VNC0 1218 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 CLLU1Q5K131 121 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 CXorf57Q6NSI4 855 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 VHLLQ6RSH7 139 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 TEX261Q6UWH6 196 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 DENND1CQ8IV53 801 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 LIX1LQ8IVB5 337 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 NLGN4XQ8N0W4 816 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 ZNF561Q8N587 486 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 OR4K2Q8NGD2 314 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 ING5Q8WYH8 240 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 MYO19Q96H55 970 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 CPEB1Q9BZB8 566 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 CWH43Q9H720 699 aa7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 UNKLQ9H9P5 680 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-219ENST00000514743 SLC52A3Q9NQ40 469 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms