RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TRAF6Q9Y4K3 522 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 MMACHCQ9Y4U1 282 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 CROCCQ5TZA2 2017 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 LRRK2Q5S007 2527 aa8.17□□□□□ -1.1
PDLIM5-213ENST00000509357 ATP6AP2A0A1C7CYW4 349 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SAGE2PA6NJ88 616 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 GABRR3A8MPY1 467 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 HMGB1P1B2RPK0 211 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 NPIPB8E9PQR5 432 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 LSM1O15116 133 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 PGRMC2O15173 223 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 FGF17O60258 216 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SEMA7AO75326 666 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SKAP2O75563 359 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ATP6AP2O75787 350 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SEMA3DO95025 777 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 AIFM1O95831 613 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CRYABP02511 175 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 KLK1P06870 262 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 LINC00032P0C843 101 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 UROSP10746 265 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 EDN3P14138 238 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CD46P15529 392 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CD1EP15812 388 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 HMOX2P30519 316 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SERPINB1P30740 379 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 PTGER1P34995 402 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SSR2P43308 183 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 HSD17B7P56937 341 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ID2Q02363 134 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CSTF3Q12996 717 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 IFT88Q13099 833 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SLAMF1Q13291 335 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 OR1C1Q15619 314 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 INAQ16352 499 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF750Q32MQ0 723 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 RFTN2Q52LD8 501 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 TMEM35AQ53FP2 167 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF766Q5HY98 468 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CFAP157Q5JU67 520 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CGB2Q6NT52 195 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 RPUSD3Q6P087 351 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 RNF165Q6ZSG1 346 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CLNKQ7Z7G1 428 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 RPS19BP1Q86WX3 136 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF595Q8IYB9 648 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ZCCHC7Q8N3Z6 543 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ST6GALNAC3Q8NDV1 305 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF75CPQ92670 426 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 TM4SF18Q96CE8 201 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 REPS1Q96D71 796 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 EGLN2Q96KS0 407 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 PPP1R36Q96LQ0 422 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 TBCDQ9BTW9 1192 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 TRMOQ9BU70 441 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 RNF32Q9H0A6 362 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ELOVL6Q9H5J4 265 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 BRF2Q9HAW0 419 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 KLHL1Q9NR64 748 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 ADGRE2Q9UHX3 823 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 FBXW2Q9UKT8 454 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SNX6Q9UNH7 406 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 OSGIN2Q9Y236 505 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC5A6Q9Y289 635 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 CLCA3PQ9Y6N3 262 aa8.16□□□□□ -1.1
PDLIM5-213ENST00000509357 TRBV11-1A0A0K0K1C0 115 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 TCRBV16S1A1N1A0A5B0 115 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CLEC18AA5D8T8 446 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 GOLGA6L10A6NI86 522 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 GLOD5A6NK44 160 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 TMEM114B3SHH9 223 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 HRKO00198 91 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 FCHO1O14526 889 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 PROM1O43490 865 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 LDB3O75112 727 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 ULK1O75385 1050 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 RSL1D1O76021 490 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CLPSP04118 112 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CPN2P22792 545 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 PRPH2P23942 346 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 PTX3P26022 381 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 TLX1P31314 330 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CD96P40200 585 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CYB561P49447 251 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CLCN2P51788 898 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 HK2P52789 917 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 STX3Q13277 289 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 TUBA3CQ13748 450 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 MPEG1Q2M385 716 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 HHATQ5VTY9 493 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 TTC19Q6DKK2 380 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 SPINK14Q6IE38 97 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 H3F3CQ6NXT2 135 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 TUBA3EQ6PEY2 450 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 CLEC18BQ6UXF7 455 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 OR4N5Q8IXE1 308 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 KIF2BQ8N4N8 673 aa8.15□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF321PQ8N8H1 164 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms